1. Chapter 9 (part 2) Lipids and Membranes

2. Triacylglycerols (TAG) Fats and oils Impt source of metabolic fuels Because more reduced than carbos, oxidation of TAG yields more energy (16 kJ/g carbo vs. 37 kJ/g TAG) Americans obtain between 20 and 30% of their calories from fats and oils. 70% of these calories come from vegetable oils Insulation – subcutaneous fat is an important thermo insulator for marine mammals

3. Olestra Olestra is sucrose with fatty acids esterified to –OH groups digestive enzymes cannot cleave fatty acid groups from sucrose backbone Problem with Olestra is that it leaches fat soluble vitamins from the body

4. Head Tail

6. rubber

7. amorphousPoly-isoprene (Greater than 80 carbons) Rubber (>80,000 Carbons) Gutta-Percha

8. The reason rubber is elastic and gutta percha is plastic Gutta-percha forms crystalline arrays Rubber forms an amorphous structure

9. Steroids Based on a core structure consisting of three 6-membered rings and one 5-membered ring, all fused together Triterpenes – 30 carbons Cholesterol is the most common steroid in animals and precursor for all other steroids in animals Steroid hormones serve many functions in animals - including salt balance, metabolic function and sexual function

10. cholesterol Cholesterol impt membrane component Only synthesized by animals Accumulates in lipid deposits on walls of blood vessels – plaques Plaque formation linked to cardiovascular disease

11. Steroids

12. Many steroids are derived from cholesterol

13. Barrier to toxic molecules Help accumulate nutrients Carry out energy transduction Facilitate cell motion Modulate signal transduction Mediate cell-cell interactions Membranes

14. The Fluid Mosaic Model The phospholipid bilayer is a fluid matrix The bilayer is a two-dimensional solvent Lipids and proteins can undergo rotational and lateral movement Two classes of proteins: –peripheral proteins (extrinsic proteins) –integral proteins (intrinsic proteins)

15. The Fluid Mosaic Model

16. Motion in the bilayer Lipid chains can bend, tilt and rotate Lipids and proteins can migrate ("diffuse") in the bilayer Frye and Edidin proved this (for proteins), using fluorescent-labelled antibodies Lipid diffusion has been demonstrated by NMR and EPR (electron paramagnetic resonance) and also by fluorescence measurements Diffusion of lipids between lipid monolayers is difficult.

17. fusion After 40 minutes

18. Flippases Lipids can be moved from one monolayer to the other by flippase proteins Some flippases operate passively and do not require an energy source Other flippases appear to operate actively and require the energy of hydrolysis of ATP Active flippases can generate membrane asymmetries

20. Membranes are Asymmetric In most cell membranes, the composition of the outer monolayer is quite different from that of the inner monolayer

21. Membrane Phase Transitions Below a certain transition temperature, membrane lipids are rigid and tightly packed Above the transition temperature, lipids are more flexible and mobile The transition temperature is characteristic of the lipids in the membrane

22. Phase Transitions Only pure lipid systems give sharp, well- defined transition temperatures Red = pure phospholipid Blue = phopholipid + cholesterol

23. Structure of Membrane Proteins Integral (intrinsic) proteins Peripheral (extrinsic) proteins Lipid-anchored proteins

24. Peripheral Proteins Peripheral proteins are not strongly bound to the membrane They can be dissociated with mild detergent treatment or with high salt concentrations

25. Integral Membrane Proteins Integral proteins are strongly imbedded in the bilayer They can only be removed from the membrane by denaturing the membrane (organic solvents, or strong detergents) Often transmembrane but not necessarily Glycophorin, bacteriorhodopsin are examples

26. Seven membrane-spanning alpha helices, connected by loops, form a bundle that spans the bilayer in bacteriorhodopsin. The light harvesting prosthetic group is shown in yellow. Bacteriorhodopsin has loops at both the inner and outer surface of the membrane. It displays a common membrane- protein motif in that it uses alpha helices to span the membrane.

27. Lipid-Anchored Proteins Four types have been found: –Amide-linked myristoyl anchors –Thioester-linked fatty acyl anchors –Thioether-linked prenyl anchors –Glycosyl phosphatidylinositol anchors

28. Amide-Linked Myristoyl Anchors Always myristic acid Always N-terminal Always a Gly residue that links

29. Thioester/ester-linked Acyl Anchors Broader specificity for lipids - myristate, palmitate, stearate, oleate all found Broader specificity for amino acid links - Cys, Ser, Thr all found

31. Thioether-linked Prenyl Anchors Prenylation refers to linking of "isoprene"-based groups Always Cys of CAAX (C=Cys, A=Aliphatic, X=any residue) Isoprene groups include farnesyl (15- carbon, three double bond) and geranylgeranyl (20-carbon, four double bond) groups