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GTTAAAAAGTGTCGCTGCC--- GATCAGTAGGTAGAGTGGCGCCCCGAGGTCTGCATCGTGTAGAGTGGTTGATCTCACGATGCAGACTCC TACTGCTGTCTAACGGGGGAGGGTATGCGGCGCTACACACTTAC GTTAAATTTCCGTAGCC---

Published byDarby Daigh Modified over 9 years ago

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Presentation on theme: "GTTAAAAAGTGTCGCTGCC--- GATCAGTAGGTAGAGTGGCGCCCCGAGGTCTGCATCGTGTAGAGTGGTTGATCTCACGATGCAGACTCC TACTGCTGTCTAACGGGGGAGGGTATGCGGCGCTACACACTTAC GTTAAATTTCCGTAGCC---"— Presentation transcript:

1 GTTAAAAAGTGTCGCTGCC--- GATCAGTAGGTAGAGTGGCGCCCCGAGGTCTGCATCGTGTAGAGTGGTTGATCTCACGATGCAGACTCC TACTGCTGTCTAACGGGGGAGGGTATGCGGCGCTACACACTTAC GTTAAATTTCCGTAGCC--- GTGCGCGACCAATCTATGCACTTGGTAGCGGCAGCGGGAACACACTTAC GTTAAAAAGTGCGCCCTTAGCGAAG--- ACGCAGCGACGGGAAGCACTTACACTTAC GTTAAAAAATCCTTGAGTC--- GCGCTTGTGACCGCGTGGTTAGGGGGGGATTTTACACTTAC GTTAAAATTATCCCTTGTC--- TATGACCTCCACGAGCGGAAAATCCATCGTGTTGGATGGATGGAACGCCTAGATCGTTTTCTAGGGAGT GGGATAACAACTTAC GTTAAAAAGTGTCGCTGCC--- GGACAGTAGGTAGAGTGGCGCCCCAAGGTTTACGTCGTGCAGGGTGGTTGACCTCGCGGCGTAAATTCC CACTGCTGTATAACGGGGGAGGGTGCGCGATACTACACACTTAC 5’ 3’ BTV-1 S10 BTV-1 S3 BTV-1 S5 BTV-1 S8 AHSV-4 S10 BTV-10 S10 5’ UTR 3’ UTR BTV-1 S10 BTV-1 S3 BTV-1 S5 BTV-1 S8 AHSV-4 S10 BTV-10 S10 A

2 B Supplementary Figure 1 BTV-1 S10 (WT) S3/S10S5/S10 S8/S10 A4/B1 S10B10/B1 S10

3 Supplementary Figure 1. A. The 5’ and 3’-UTR sequences of BTV-1 S10, S3, S5, S8, AHSV-4 S10 and BTV-10 S10. B. Secondary RNA structures at the UTRs of wild-type BTV-1 S10 and chimeric S10 RNAs (S3/S10 to A4/B1 S10) are depicted as predicted using RNAfold prediction software (minimum free energy (MFE) and partition function at 37°C, Turner model 1999).

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