Presentation is loading. Please wait.

Presentation is loading. Please wait.

Unweighted pair group method using average linkages (UPGMA) tree showing the phylogenetic relationship of the 200 most abundant OTUs across all samples.

Published byLester Riley Modified over 5 years ago

Similar presentations

Presentation on theme: "Unweighted pair group method using average linkages (UPGMA) tree showing the phylogenetic relationship of the 200 most abundant OTUs across all samples."— Presentation transcript:

1 Unweighted pair group method using average linkages (UPGMA) tree showing the phylogenetic relationship of the 200 most abundant OTUs across all samples. Unweighted pair group method using average linkages (UPGMA) tree showing the phylogenetic relationship of the 200 most abundant OTUs across all samples. The tree file was generated using representative sequences from all 200 OTUs in MEGA 7 and visualized using iToL software. Each phylum is color highlighted, and the average percent abundancies of each OTU for the four groups are shown. Helena Fagö-Olsen et al. mSystems 2019; doi: /mSystems

Download ppt "Unweighted pair group method using average linkages (UPGMA) tree showing the phylogenetic relationship of the 200 most abundant OTUs across all samples."

Similar presentations

Phylogenetics and Coalescence Lab 9 October 24, 2012.

Phylogenetics and Coalescence Lab 9 October 24, 2012.
Small Indian mongooses and masked palm civets serve as new reservoirs of Bartonella henselae and potential sources of infection for humans  S. Sato, H.

Small Indian mongooses and masked palm civets serve as new reservoirs of Bartonella henselae and potential sources of infection for humans  S. Sato, H.
Taxonomic composition of subway microbial communities.

Taxonomic composition of subway microbial communities.
Diversity of plants in a diet.

Diversity of plants in a diet.
Fig. 4 Bacterial taxonomic groups that discriminate among RYGB-, SHAM-, and WMS-derived samples. Bacterial taxonomic groups that discriminate among RYGB-,

Fig. 4 Bacterial taxonomic groups that discriminate among RYGB-, SHAM-, and WMS-derived samples. Bacterial taxonomic groups that discriminate among RYGB-,
Heatmap displaying consistent similarity-based OTU results based on SIMPER intragroup similarity analyses for the tissue, mucus, holobiont, and seawater.

Heatmap displaying consistent similarity-based OTU results based on SIMPER intragroup similarity analyses for the tissue, mucus, holobiont, and seawater.
Relative abundances of the top 10 most abundant OTUs across all fish samples are shown along with the data from the probiotic B. pumilus RI06-95 (OTU 3673)

Relative abundances of the top 10 most abundant OTUs across all fish samples are shown along with the data from the probiotic B. pumilus RI06-95 (OTU 3673)
Evidence of genotypic diversity among Candida auris isolates by multilocus sequence typing, matrix-assisted laser desorption ionization time-of-flight.

Evidence of genotypic diversity among Candida auris isolates by multilocus sequence typing, matrix-assisted laser desorption ionization time-of-flight.
Microbial flora of giant pandas.

Microbial flora of giant pandas.
Transdomain taxonomic profiles from subway shotgun metagenomes.

Transdomain taxonomic profiles from subway shotgun metagenomes.
Cluster diagram for four patient pairs with genotyped strains sharing the same sequence typing (ST). Cluster diagram for four patient pairs with genotyped.

Cluster diagram for four patient pairs with genotyped strains sharing the same sequence typing (ST). Cluster diagram for four patient pairs with genotyped.
Formula feeding affects the resistome.

Formula feeding affects the resistome.
Heat map displaying the abundances of bacterial families identified on plastics particles collected from the North Atlantic Subtropical Gyre (NASG, samples.

Heat map displaying the abundances of bacterial families identified on plastics particles collected from the North Atlantic Subtropical Gyre (NASG, samples.
(a) PCoA of the abundance of unique OTUs per sample from the 16S marker gene sequencing data from the AGP data repository (small spheres) and the San Diego.

(a) PCoA of the abundance of unique OTUs per sample from the 16S marker gene sequencing data from the AGP data repository (small spheres) and the San Diego.
(a) Bifurcating tree generated from hierarchical clustering of OTUs based on mean pH. (a) Bifurcating tree generated from hierarchical clustering of OTUs.

(a) Bifurcating tree generated from hierarchical clustering of OTUs based on mean pH. (a) Bifurcating tree generated from hierarchical clustering of OTUs.
Phylogenetic analysis of 3,582 HAV isolates in the VP1/P2B region (315-bp fragment). Phylogenetic analysis of 3,582 HAV isolates in the VP1/P2B region.

Phylogenetic analysis of 3,582 HAV isolates in the VP1/P2B region (315-bp fragment). Phylogenetic analysis of 3,582 HAV isolates in the VP1/P2B region.
Fluoride affects stool-derived taxa found in the oral cavity.

Fluoride affects stool-derived taxa found in the oral cavity.
Plots of the number of sequences [log (x + 1) scale] from bacterial OTUs in both PCR replicates (PCR1 and PCR2) of the 348 wild rodents analyzed in the.

Plots of the number of sequences [log (x + 1) scale] from bacterial OTUs in both PCR replicates (PCR1 and PCR2) of the 348 wild rodents analyzed in the.
Nonmetric multidimensional scaling (NMDS) plots of fecal and biopsy sample-based Bray-Curtis distances computed from the relative abundances of the 258.

Nonmetric multidimensional scaling (NMDS) plots of fecal and biopsy sample-based Bray-Curtis distances computed from the relative abundances of the 258.
(a) Correspondence analysis of 88 soil samples.

(a) Correspondence analysis of 88 soil samples.

Similar presentations

Ads by Google