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Stereoisomers Molecules with the same molecular formula and connectivity but different 3-D arrangement of atoms e.g. conformers – differ by rotation about C-C s bonds Relatively easily interconverted by heat e.g. cis-trans isomerism – not easily converted
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Stereochemistry 1. Chiral molecules/enantiomers
a. The R,S nomenclature system 2. Molecules with >1 chiral centre Diastereoisomers Meso compounds The Fischer nomenclature for sugars
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Ranking Priorities: Cahn-Ingold-Prelog Rules (chapter 6.5 – p 182)
Must rank atoms that are connected at comparison point Higher atomic number gets higher priority Br > Cl > S > P > O > N > C > H RULE 2 If atomic numbers are the same, compare at next connection point at same distance Compare until something has higher atomic number Do not combine – always compare
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Dealing With Multiple Bonds:
RULE 3 Substituent is drawn with connections shown and no double or triple bonds Added atoms are valued with 0 ligands themselves
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Sequence Rules Rule 1: • Assign each group priority according to the Cahn Ingold-Prelog scheme • With the lowest priority group pointing away, look at remaining 3 groups in a plane • Clockwise is designated R (from Latin for “right”) • Counterclockwise is designated S (from Latin word for “left”)
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Rule 2: If decision can’t be reached by ranking the first atoms in the substituents, look at the second, third, or fourth atoms until difference is found Rule 3: Multiple-bonded atoms are equivalent to the same number of single-bonded atoms
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Some facts about Enantiomers
A 50:50 mixture of two chiral compounds (R and S forms) not rotate light – is called a racemic mixture Enantiomers have identical physical properties – difficult to separate them Enantiomers have identical chemical properties in most reactions – unless reagents are themselves chiral Overwhelming majority of non-biological reactions which produce chiral compounds result in a racemic mixture. Most biological reactions however usually are stereospecific – reaction with only one enantiomer or produces only one enantiomer
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Diastereomers Molecules with more than one chirality center
Stereoisomeric forms that are not mirror images are called diastereomers
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Meso Compounds A compound with chiral centers with a plane of symmetry is called a meso compound A meso compound is achiral
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Fischer Projections of sugar molecules – How to interpret Fischer Projections
From wikipedia
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