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Meatgenome Analysis Project Bioinformatics 301

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Presentation on theme: "Meatgenome Analysis Project Bioinformatics 301"— Presentation transcript:

1 Meatgenome Analysis Project Bioinformatics 301
Prepared by Michael kassa

2 Read and similarities OCTHSE.ATYB5997-B2 and OCTHSE.ATYB5997-G2

3 Extended Read Brown = OctHSe. ATY 5997-b2 (my Read) Green =OctHSe
Extended Read Brown = OctHSe.ATY 5997-b2 (my Read) Green =OctHSe.APN4301-b2; Blue = OctHSe.APN-b2; orange =OctHSe.APNO3102-b2

4 Predicted Genes

5 NCBI Blast Result protein database using a translated nucleotide

6 NCBI Blast Result protein database using a translated nucleotide continued….

7 Reading- Frames-Of the extended sequence

8 Reading- Frames-Of the extended sequence from BioBike
Results are similar with the results I found using NCBI

9 Protein Result from BioBike
NC_ p-gene0008 Sequence-Length =585 Class – Eukaryotic- Virus Organism- Metapneumovirus Human metapneumovirus (hMPV) was isolated for the first time in 2001 in the Netherlands, by using the RAP-PCR (RNA arbitrarily primed PCR) technique for identification of unknown viruses growing in cultured cells.


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