Presentation is loading. Please wait.

Presentation is loading. Please wait.

Interval Mapping.

Published byEthelbert Preston Modified over 5 years ago

Similar presentations

Presentation on theme: "Interval Mapping."— Presentation transcript:

1 Interval Mapping

2 Interval Mapping Program
- Type of Study - Genetic Design

3 Interval Mapping Program
- Data and Options Names of Markers: (Optional) Map Function QTL Searching Step cM Parameters Here for Simulation Study Only

4 Interval Mapping Program
- Data Put Markers and Traits Data into box below OR Note: Multiple traits are followed by markers defined in previous cumulative marker distances. Code: 1-mm, 2-mM, 3-MM, 0-Missing

5 Interval Mapping Program
- Analyze Data Trait:

6 Interval Mapping Program
- Profile

7 Interval Mapping Program
- Permutation Test #Tests Cut off Point at Level Is Based on Tests.

Download ppt "Interval Mapping."

Similar presentations

Test practice Multiplication. Multiplication 9x2.

Test practice Multiplication. Multiplication 9x2.
Mapping a trait. Types of trait: 1.Monogenic 2.Polygenic-Quantitative-continuous QT are the cumulative effect of many genes and are environment dependent.

Mapping a trait. Types of trait: 1.Monogenic 2.Polygenic-Quantitative-continuous QT are the cumulative effect of many genes and are environment dependent.
Selective mapping and simulation study. high-density genome maps Are used for: Comparative mapping Map-based cloning Genome sequencing But genotyping.

Selective mapping and simulation study. high-density genome maps Are used for: Comparative mapping Map-based cloning Genome sequencing But genotyping.
$100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300.

$100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300.
Put Markers and Trait Data into box below Linkage Disequilibrium Mapping - Natural Population OR.

Put Markers and Trait Data into box below Linkage Disequilibrium Mapping - Natural Population OR.
1 QTL mapping in mice Lecture 10, Statistics 246 February 24, 2004.

1 QTL mapping in mice Lecture 10, Statistics 246 February 24, 2004.
Statistical association of genotype and phenotype.

Statistical association of genotype and phenotype.
Bull selection based on QTL for specific environments Fabio Monteiro de Rezende Universidade Federal Rural de Pernambuco (UFRPE) - Brazil.

Bull selection based on QTL for specific environments Fabio Monteiro de Rezende Universidade Federal Rural de Pernambuco (UFRPE) - Brazil.
QTL mapping in animals. It works QTL mapping in animals It works It’s cheap.

QTL mapping in animals. It works QTL mapping in animals It works It’s cheap.
Figure S2. Genetic maps and QTL locations for ‘Beihong’ (BH, maternal parent) × and ‘E.S.7-11-49’ (ES, paternal parent). Markers are listed to the right.

Figure S2. Genetic maps and QTL locations for ‘Beihong’ (BH, maternal parent) × and ‘E.S ’ (ES, paternal parent). Markers are listed to the right.
$100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300.

$100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300.
Timers in Unreal By Todd Brown. Setting up a timer Add ‘simulated function Timer()’ to your class Within this function, put the code for whatever you.

Timers in Unreal By Todd Brown. Setting up a timer Add ‘simulated function Timer()’ to your class Within this function, put the code for whatever you.
Fine mapping QTLs using Recombinant-Inbred HS and In-Vitro HS William Valdar Jonathan Flint, Richard Mott Wellcome Trust Centre for Human Genetics.

Fine mapping QTLs using Recombinant-Inbred HS and In-Vitro HS William Valdar Jonathan Flint, Richard Mott Wellcome Trust Centre for Human Genetics.
Class 3 1. Construction of genetic maps 2. Single marker QTL analysis 3. QTL cartographer.

Class 3 1. Construction of genetic maps 2. Single marker QTL analysis 3. QTL cartographer.
To access our web services, go to……. Click on Customer Login.

To access our web services, go to……. Click on Customer Login.
Functional Mapping of QTL and Recent Developments

Functional Mapping of QTL and Recent Developments
QTL Cartographer A Program Package for finding Quantitative Trait Loci C. J. Basten Z.-B. Zeng and B. S. Weir.

QTL Cartographer A Program Package for finding Quantitative Trait Loci C. J. Basten Z.-B. Zeng and B. S. Weir.
Population structure at QTL d A B C D E Q F G H a b c d e q f g h The population content at a quantitative trait locus (backcross, RIL, DH). Can be deduced.

Population structure at QTL d A B C D E Q F G H a b c d e q f g h The population content at a quantitative trait locus (backcross, RIL, DH). Can be deduced.
Lecture 20 - Association Tests Gibson and Muse, Chapt. 3, 2nd Ed.

Lecture 20 - Association Tests Gibson and Muse, Chapt. 3, 2nd Ed.
Software Designing Interface – user friendly (think about MSoffice) –using menu, form, toolbars … –as simple as possible –using default setting, but allow.

Software Designing Interface – user friendly (think about MSoffice) –using menu, form, toolbars … –as simple as possible –using default setting, but allow.

Similar presentations

Ads by Google