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Loss of heterozygosity in human colon cancers

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Presentation on theme: "Loss of heterozygosity in human colon cancers"— Presentation transcript:

1 Loss of heterozygosity in human colon cancers
Figure The Biology of Cancer (© Garland Science 2007)

2 The AS/PWS region of chromosome 15q
Redrawn and updated from Jiang et al. Am J Hum Genet 65:1-6 (1999)

3 22q11 deletion di George Syndrome / Velocardiofacial Syndrome
Findings can include Dysmorphic appearance/short stature Cleft palate Conotruncal heart defects Developmental delay Immunologic abnormalities Hypocalcemia Psychiatric illness Sporadic or autosomal dominant There are many associated abnormalities which may sometimes be transmitted as a dominantly inherited condition

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5 Chromosomal structural variants with phenotypic effects
from Sharp et al. Annu Rev Genomics Hum Genet 7: , 2006

6 individual value mean & 95% c.i. Sachse et al. Am J Hum Genet 60: (1997)

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9 Examples of diseases associated with triplet repeat expansion
repeat repeat Type Disease MIM mode sequence location normal pre-mut’n mutation I HD AD CAG ORF I SCA AD CAG ORF I SCA AD CAG ORF I MJD AD CAG ORF II DM AD CTG 3' UTR ~ ~200 - >2000 II FRAXA X* CGG 5' UTR >2000

10 Size of SCA7 repeat correlates with age of disease onset
redrawn from Giunti et al. Am J Hum Genet 64:1594(1999)

11 from Zoghbi HY, “The expanding world of ataxins”
(Nature Genetics 14: , 1996)

12 Inheritance of fragile-X alleles and phenotypes
PARENT XfX+ XfX+ XfY carrier female affected female transmitting male CHILDREN 25% X+X+ 25% X+X normal female normal female 25% X+Y 25% X+Y 50% X+Y normal male normal male normal male 8% XfX+ 14% XfX affected female affected female 17% XfX+ 11% XfX+ 50% XfX carrier female carrier female carrier female 19% XfY 25% XfY affected male affected male 6% XfY transmitting male


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