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Testing for Parvovirus B19 - Broadening the Assay to Cover Variants

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Presentation on theme: "Testing for Parvovirus B19 - Broadening the Assay to Cover Variants"— Presentation transcript:

1 Testing for Parvovirus B19 - Broadening the Assay to Cover Variants
Sally Baylis, NIBSC SoGAT XVII

2 Screening Plasma Pools for Parvovirus B19 - an OMCL Perspective
European Pharmacopoeia Monographs: “Human anti-D immunoglobulin” & “Human anti-D immunoglobulin for intravenous administration” (Jan. 2004) “Human plasma (pooled and treated for virus inactivation)” (July 2004) Plasma pools should contain not more than 104 IU/ml parvovirus B19 DNA

3 Variant Erythroviruses
V9 isolated from a child with transient aplastic crisis (Nguyen et al., 1998, 1999) LaLi, K71 dermal isolates (Hokynar et al., 2002) A6 isolated from an anaemic HIV-positive patient (Nguyen et al., 2002) D91.1 isolated from a child with transient aplastic crisis (Servant et al., 2002) Classification proposed by Servant et al., (2002) based upon sequence analysis of the NS1/VP1 region

4 Genetic Diversity of Erythroviruses: Analysis of the NS1/VP1 Region
Servant et al., J. Virol., 2002

5 Roche Parvovirus B19 Quantification Kit
- Genotype 1 Fluorescence (F2/Back Fluorescence (F1/F2) Genotype 2 NTC Genotype 3 M NTC M Cycle Number Cycle Number Region amplified: NS1

6 Artus RealArtTM Parvo B19 LC Kit
Cycle Number Fluorescence (F2/Back - F1) Genotype 3 Genotype 2 Genotype 1 NTC M NTC M Region amplified: VP1

7 Sensitivity of Detection of Different Erythrovirus Genotypes

8 In-house Erythrovirus TaqMan Assay
Consensus assay, primers & probe directed to the NS1 gene Manufacturing plasma pools (Europe, North America) Extraction using the MagNA Pure (Total Nucleic Acid, large volume) & real-time PCR on the LightCycler Standard curve – WHO International Standard for parvovirus B19 (99/800)

9 In-house Erythrovirus TaqMan Assay
Genotype 3 Genotype 2 Genotype 1 Fluorescence (F1/F2) NTC Cycle Number NTC Genotype 1 Genotype 3 Genotype 2 Temperature C Fluorescence d(F1)/ dT

10 Conclusions The commercial assays have limitations in the detection and quantification of the variant erythroviruses Of 58 plasma pools screened with the Roche & in-house TaqMan assays, results for parvovirus B19 are in agreement No evidence currently for the presence of variant erythroviruses in manufacturing pools examined by NIBSC

11 Discussion Primer & probe design affects ability to detect and quantify variant viruses Compliance with EP threshold concentration of 104 IU/ml may be compromised Clinical significance, prevalence & geographical distribution of erythrovirus variants is still largely unknown What are the implications in detecting a pools with high titres of a variant erythrovirus?

12 Acknowledgements Kevin Brown, NIH
Daniel Candotti & Jean-Pierre Allain, Cambridge Kati Hokynar & Klaus Hedman, University of Helsinki Annabelle Servant & Antoine Garbarg-Chenon, Paris


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