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The Gene Suite Dr. Laurel Estabrooks, PhD, FACMG VP Genetics Business Development SCC Soft Computers.

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Presentation on theme: "The Gene Suite Dr. Laurel Estabrooks, PhD, FACMG VP Genetics Business Development SCC Soft Computers."— Presentation transcript:

1 The Gene Suite Dr. Laurel Estabrooks, PhD, FACMG VP Genetics Business Development SCC Soft Computers

2 SCC Core Products BANK Transfusion Service Mngmt BB BILL Billing scrubber CCI LAB Comp. multisite platform Gen. Lab MIC Paperless culture- Based Micro ID Positive Patient ID Phleb. ID.Tx Positive Pt ID for Transfusion Admin. WEB+ Physician Portal Orders and Results REPORTS Patient and Operational Reports MEDIA Storage of images for all applications Cytog Chrom FISH CGH Molec Molecular Diag. Genetics Micro HLA HLA Testing PathDx Anat. Path Cytology Flow Flow Cytometry Biochem Tox TQC facilitate and analyze QC across apps

3 Common Functionality Preanalytical Analytical Reporting

4 Pre-Analytical Order entry –Electronic order entry from interfaces HIS SoftLAB SoftGenePortal –Manual order entry Configurable interfaces/screens

5 SNUG 16th Annual Conference 2008

6 Pre-Analytical Routing –Multi-technology/site samples –Rules driven

7 Pre-Analytical Linkage of patients by study/family –Research –Clinical trials –Families –Pedigree functionality

8 Pedigree functionality

9 Analytical Specimen Tracking –Bar code driven –Labels are customizable –Supports real time tracking Original sample Aliquot Slides Cultures Blocks

10 Processing Chart Tracking SNUG 16th Annual Conference 2008

11 Analytical Workflow based –Actions & Protocols –Can be bar code completed

12 Protocol Definition SNUG 16th Annual Conference 2008

13 Actions, Protocols, Workflows

14 Analytical Result entry –Instrument interfaces –Import/Export –Manual entry

15 Interpretation Canned Messages –Auto-population based on Reporting Rules –Free text fields, merged fields, drop down –Error prevention rules –Canned Message Hierarchy

16 SNUG 16th Annual Conference 2008

17 Report Generation Report templates customizable Can include –Images –Tables –Previous test results –Family test results –Hyperlinks –Signed out results from other technologies (integrated reports)

18 SNUG 16th Annual Conference 2008

19 Report Generation Dynamic reporting –Within a technology module, sequential with most recent report at top Integrated reporting –Across technologies –Allows for comprehensive interpretation within an order

20 Report Delivery Interface –SoftLAB –HIS –EMR FAX/Print/Email Soft Gene Portal

21 Common Functionality Billing Support Reagent Management RBS Storage Queries

22 Billing Based on CPT codes Supports Professional/Technical/ Global billing Can be manually edited Interface with –Soft A/R, SoftBillPlus, SoftBill –Foreign A/R system

23 SNUG 16th Annual Conference 2008

24 Reagent Management Reagent quality control Reagent usage Supports tracking/trending when troubleshooting Includes working solution functionality

25 Reagent Management SNUG 16th Annual Conference 2008

26 Define on various levels –Site, department, room, large container, inner container, shelf, box, position Check in/Check Storage Functionality SNUG 16th Annual Conference 2008

27 Storage Management SNUG 16th Annual Conference 2008

28 RBS Rules Based System Ensure Policy & Procedure compliance Communication Error reduction Client specific requirements

29 SNUG 16th Annual Conference 2008

30 Queries Management Reports (standard) User Defined Queries (drag & click) Ad Hoc Queries

31 SCC Gene Products Cytog Molec HLA PathDx Flow Biochem

32 Molecular Module Testing Labs Virology Microbiology Toxicology Forensic Molecular Oncology/Pathology Molecular Genetics/Genomics

33 Molecular Module Technologies PCR Microarrays Sequencing –Sanger –Next Generation Sequencing Panels WES WGS

34 Molecular Module Functionality Supports plate positioning Charts for trending Multiple results per test –Categorizing, Annotating Selection of reportable results

35 Molecular - Plate View SNUG 16th Annual Conference 2008

36 Molecular – CMV Tasklist SNUG 16th Annual Conference 2008

37 Molecular - NGS SNUG 16th Annual Conference 2008

38 NGS Gene Master Table SNUG 16th Annual Conference 2008

39 Biochemistry Module Testing Labs/Technologies Biochemistry Toxicology Virology/Microbiology

40 Biochemistry Module Functionality

41 PathDx Module Labs/Technologies Cytology Surgical Path Autopsy

42 PathDx Module Functionality Synoptic Reporting in both HTML view or tree view Built in voice dictation system Interface to stainers Slide imaging Telepathology (interface to imaging systems)

43 Synoptic Reporting SNUG 16th Annual Conference 2008

44 Flow Cytometry Module Testing Labs Immunology Hematology Chemotherapy Pathology Prenatal diagnosis Molecular Biology

45 Flow Cytometry Module Technologies Cytometry Cell phenotyping Cell cycle analysis Protein Engineering

46 Flow Cytometry Module Functionality Upload batched sample information with cytometer list positions Bridge to analysis module to gate data Billing per antigen Panel build/edit on the fly

47 Ability to add/delete sets SNUG 16th Annual Conference 2008

48 Attach Images/Analysis to Order SNUG 16th Annual Conference 2008

49 Cytogenetics/genomics Labs & Technologies Prenatal Postnatal Oncology Chromosome analysis FISH (Fluorescence in situ Hybridization) Microarrays

50 Cytogenetics/genomics Functionality Tissue Culture Karyogram & FISH images on report –Interfaces with karyotyping foreign systems –Interfaces with auto cell scanners (GSL) Customizable count sheets FISH signal pattern key pads

51 FISH Keypads SNUG 16th Annual Conference 2008

52 HLA Labs & Technologies HLA/Immunogenetics HLA typing PRA(panel reactive antibody) Crossmatch - recipient serum donor cells Disease association/linkage testing

53 HLA Profile SNUG 16th Annual Conference 2008

54 HLA – Multiple Patient Groups

55 Adjunct Modules SoftGenePortal SoftTQC SoftBI SoftWorkload SoftA/R, SoftBill+, SoftBill

56 Questions? SNUG 16th Annual Conference 2008 If this looks fuzzy, you need one!


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