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Botany 2012 Columbus, OH Deborah Paul, iDigInfo 0.

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Presentation on theme: "Botany 2012 Columbus, OH Deborah Paul, iDigInfo 0."— Presentation transcript:

1 Botany 2012 Columbus, OH Deborah Paul, iDigInfo 0

2 topics oMoMorphbank overview ololinking data & images ofofrom Morphbank ototo Morphbank oaoannotations oioin progress 1

3 2

4 http://www.morphbank.net/?id=796533 3

5 topics oMoMorphbank overview ololinking data & images ofofrom Morphbank ototo Morphbank oaoannotations oioin progress 4

6 linking o aggregators o ontologies o publications o maps o databases o provider websites GenBank ® Cladistics ® FilteredPUSH 5

7 linking to ontologies o Cypriniform Tree of Life (CToL) o http://www.morphbank.net/?id=459818 http://www.morphbank.net/?id=459818 6

8 linking to ontologies o Cypriniform Tree of Life (CToL) o http://www.morphbank.net/?id=459818 http://www.morphbank.net/?id=459818 7

9 linking to genbank 8

10 9

11 linking to publications 10

12 linking to publications http://www.morphbank.net/?id=464656 11

13 linking from Morphbank to provider website Lonicera fragrantissima http://www.morphbank.net/?id=786176 12

14 topics oMoMorphbank overview ololinking data & images ofofrom Morphbank ototo Morphbank oaoannotations oioin progress 13

15 linking from a paper http://www.morphbank.net/?id=464656 http://www.mapress.com/zootaxa/2009/f/zt02157p033.pdf 14

16 15

17 16

18 linking from a key E. Grissell, M. E. Schauff & Mike Gates http://www.morphbank.net/?id=111266 17

19 topics omomorphbank overview ololinking data & images ofofrom morphbank ototo morphbank oaoannotations oioin progress 18

20 annotations http://www.morphbank.net/?id=142528 19

21 annotations http://www.morphbank.net/?id=139904 20

22 annotations http://www.morphbank.net/582402 21

23 topics omomorphbank overview ololinking data & images ofofrom morphbank ototo morphbank oaoannotations oioin progress 22

24 new & in development o http://services.morphbank.net/mb3/ o validation service validation service o two new Upload methods o from Specify (prototype) o working on upload from a DwC-A file o new Morphbank shared folder service o in development o FilteredPUSH testing o in progress o Morphbank V4 (Drupal) 23

25 integration with o iDigBio – primary repository for data discovery o import to a local instance of Morphbank o updates and annotations shared o iDigBio updates / annotations to Morphbank o Morphbank updates / annotations to iDigBio o push local records to iDigBio 24

26 acknowledgements Morphbank Contributors & Collaborators o CBG, AToL, PEET, PBI, MX, HERBIS, CToL, PlantCollections Project, SERNEC, FSU, PlatyPBI, SAIN, UAM, EoL, Specify, USMS, TTRS, Bioimages, Auburn, Troy, Ohio State, USM, LA NHM, Smithsonian, TTRS, USD, … 25

27 Thanks from the Morphbank Team ~ 2012 o Greg Riccardi o Austin Mast o Fredrik Ronquist o Debbie Paul o Robert Bruhn o Guillaume Jimenez o Casey McLaughlin o Steven Winner o Katja Seltmann o Albert Prieto-Marquez o Corinne Jorgensen o Michael Jennings o Neelima Jammigumpula o Karolina Jakimoska o David Gaitros o Cynthia Gaitros o Greg Erickson o Andrew Deans o Christopher Cprek o Wilfredo Blanco 26


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