Dr. Gheith Abandah 1.  Feature selection is typically a search problem for finding an optimal or suboptimal subset of m features out of original M features.

Slides:



Advertisements
Similar presentations
Feature Selection for Pattern Recognition J.-S. Roger Jang ( 張智星 ) CSIE Dept., National Taiwan University ( 台灣大學 資訊工程系 )
Advertisements

Data Mining Feature Selection. Data reduction: Obtain a reduced representation of the data set that is much smaller in volume but yet produces the same.
Molecular Biomedical Informatics 分子生醫資訊實驗室 Machine Learning and Bioinformatics 機器學習與生物資訊學 Machine Learning & Bioinformatics 1.
Minimum Redundancy and Maximum Relevance Feature Selection
Feature Selection of DNA Micrroarray Data
COMPUTER AIDED DIAGNOSIS: FEATURE SELECTION Prof. Yasser Mostafa Kadah –
Lecture 4: Embedded methods
Feature Selection Presented by: Nafise Hatamikhah
Exploratory Data Mining and Data Preparation
Three Papers: AUC, PFA and BIOInformatics The three papers are posted online.
Feature Selection for Regression Problems
Proteomic Mass Spectrometry
Feature Screening Concept: A greedy feature selection method. Rank features and discard those whose ranking criterions are below the threshold. Problem:
Bioinformatics Challenge  Learning in very high dimensions with very few samples  Acute leukemia dataset: 7129 # of gene vs. 72 samples  Colon cancer.
Feature Subset Selection using Minimum Cost Spanning Trees Mike Farah Supervisor: Dr. Sid Ray.
Selecting Informative Genes with Parallel Genetic Algorithms Deodatta Bhoite Prashant Jain.
Feature Selection and Its Application in Genomic Data Analysis March 9, 2004 Lei Yu Arizona State University.
Special Topic: Missing Values. Missing Values Common in Real Data  Pneumonia: –6.3% of attribute values are missing –one attribute is missing in 61%
Tree-Building. Methods in Tree Building Phylogenetic trees can be constructed by: clustering method optimality method.
Jeff Howbert Introduction to Machine Learning Winter Machine Learning Feature Creation and Selection.
CSCI 347 / CS 4206: Data Mining Module 05: WEKA Topic 04: Data Preparation Tools.
Optimal Arrangement of Ceiling Cameras for Home Service Robots Using Genetic Algorithms Stefanos Nikolaidis*, ** and Tamio Arai** *R&D Division, Square.
A REVIEW OF FEATURE SELECTION METHODS WITH APPLICATIONS Alan Jović, Karla Brkić, Nikola Bogunović {alan.jovic, karla.brkic,
Data Engineering Data preprocessing and transformation Data Engineering Data preprocessing and transformation.
A Genetic Algorithms Approach to Feature Subset Selection Problem by Hasan Doğu TAŞKIRAN CS 550 – Machine Learning Workshop Department of Computer Engineering.
Feature Selection.
Kansas State University Department of Computing and Information Sciences CIS 830: Advanced Topics in Artificial Intelligence Monday, April 3, 2000 DingBing.
315 Feature Selection. 316 Goals –What is Feature Selection for classification? –Why feature selection is important? –What is the filter and what is the.
Feature Selection Jain, A.K.; Duin, P.W.; Jianchang Mao, “Statistical pattern recognition: a review”, IEEE Transactions on Pattern Analysis and Machine.
1 Data preparation: Selection, Preprocessing, and Transformation Literature: Literature: I.H. Witten and E. Frank, Data Mining, chapter 2 and chapter 7.
A hybrid SOFM-SVR with a filter-based feature selection for stock market forecasting Huang, C. L. & Tsai, C. Y. Expert Systems with Applications 2008.
Chapter 7 FEATURE EXTRACTION AND SELECTION METHODS Part 2 Cios / Pedrycz / Swiniarski / Kurgan.
Richard Jensen, Andrew Tuson and Qiang Shen Qiang Shen Aberystwyth University, UK Richard Jensen Aberystwyth University, UK Andrew Tuson City University,
2005MEE Software Engineering Lecture 11 – Optimisation Techniques.
Why to reduce the number of the features? Having D features, we want to reduce their number to n, where n
NIPS 2001 Workshop on Feature/Variable Selection Isabelle Guyon BIOwulf Technologies.
An Efficient Greedy Method for Unsupervised Feature Selection
Computational Approaches for Biomarker Discovery SubbaLakshmiswetha Patchamatla.
Guest lecture: Feature Selection Alan Qi Dec 2, 2004.
Introduction to Weka Xingquan (Hill) Zhu Slides copied from Jeffrey Junfeng Pan (UST)
Feature Selection and Weighting using Genetic Algorithm for Off-line Character Recognition Systems Faten Hussein Presented by The University of British.
COT6930 Course Project. Outline Gene Selection Sequence Alignment.
Feature Selection Topics
Improving Support Vector Machine through Parameter Optimized Rujiang Bai, Junhua Liao Shandong University of Technology Library Zibo , China { brj,
Dimensionality Reduction in Unsupervised Learning of Conditional Gaussian Networks Authors: Pegna, J.M., Lozano, J.A., Larragnaga, P., and Inza, I. In.
Feature Selection on Time-Series Cab Data
Feature Selction for SVMs J. Weston et al., NIPS 2000 오장민 (2000/01/04) Second reference : Mark A. Holl, Correlation-based Feature Selection for Machine.
Kansas State University Department of Computing and Information Sciences CIS 830: Advanced Topics in Artificial Intelligence Friday, Febuary 2, 2001 Presenter:Ajay.
Feature Selection Methods Part-I By: Dr. Rajeev Srivastava IIT(BHU), Varanasi.
Data Mining 2, Filter methods T statistic Information Distance Correlation Separability …
Computational Intelligence: Methods and Applications Lecture 34 Applications of information theory and selection of information Włodzisław Duch Dept. of.
Feature Selection Jain, A.K.; Duin, P.W.; Jianchang Mao, “Statistical pattern recognition: a review”, IEEE Transactions on Pattern Analysis and Machine.
Alan P. Reynolds*, David W. Corne and Michael J. Chantler
Chapter 7 FEATURE EXTRACTION AND SELECTION METHODS Part 2
Presented by Jingting Zeng 11/26/2007
Rule Induction for Classification Using
Information Management course
Feature Selection for Pattern Recognition
Data preprocessing and transformation
COMP61011 Foundations of Machine Learning Feature Selection
Data Mining (and machine learning)
Machine Learning Feature Creation and Selection
Feature Selection To avid “curse of dimensionality”
Pattern Recognition CS479/679 Pattern Recognition Dr. George Bebis
A Unifying View on Instance Selection
Feature Selection Ioannis Tsamardinos Machine Learning Course, 2006
Enhancing Diagnostic Quality of ECG in Mobile Environment
Machine Learning in Practice Lecture 22
Feature Selection Methods
FEATURE WEIGHTING THROUGH A GENERALIZED LEAST SQUARES ESTIMATOR
Presentation transcript:

Dr. Gheith Abandah 1

 Feature selection is typically a search problem for finding an optimal or suboptimal subset of m features out of original M features.  Benefits: ◦ For excluding irrelevant and redundant features, ◦ it allows reducing system complexity and processing time, ◦ and often improves the recognition accuracy.  For large number of features, exhaustive search for best subset out of 2 M possible subsets is infeasible. 2

3

 Generally be classified according to the criterion function used in searching for good features. 1.Wrapper algorithm: the performance of the classifier is used to evaluate the feature subsets. 2.Filter algorithm: some feature evaluation function is used rather than optimizing the classifier’s performance.  Wrapper methods are usually slower than filter methods but offer better performance. 4

 Select best individual features. A feature evaluation function is used to rank individual features, then the highest ranked m features are selected.  Although these methods can exclude irrelevant features, they often include redundant features. “The m best features are not the best m features” 5

 Examples: 1. Scatter criterion 2. Symmetric uncertainty 6

7

8

9

10

11

 Sequential < O(M 2 ) ◦ Forward selection, e.g.,  Fast correlation-based filter (FCBF)  Minimal-redundancy-maximal-relevance (mRMR) ◦ Backward selection ◦ Bidirectional  Random ◦ Genetic algorithm, e.g.,  Multi-objective genetic algorithms (MOGA) 12

13

14

15

16

17

 Use NSGA to search for optimal set of solutions with two objectives: 1.Minimize the number of features used in classification. 2.Minimize the classification error. 18

19

20

21