NIH BioCADDIE / Force11 Data Citation Pilot Kickoff Meeting Nine Zero Hotel, Boston MA, 3 February 2016 Introduction: Tim Clark, Maryann Martone and Joan Starr

Big Data to Knowledge: Goals of BD2K Facilitate broad use of biomedical digital assets by making them discoverable, accessible, and citable. Conduct research and develop the methods, software, and tools needed to analyze biomedical Big Data. Enhance training in the development and use of methods and tools necessary for biomedical Big Data science. Support a data ecosystem that accelerates discovery as part of a digital enterprise. biocaddie.orgdatascience.nih.gov/bd2k

Goals of this Pilot 1. Biomedical articles published citing robustly archived data within 1 year. 2. Common use of Joint Declaration of Data Citation Principles (JDDCP) implementation guidelines (Starr et al. 2015); focus on primary data. 3. Publicize results in coordination with other related projects and organizations.

1. Publish biomedical articles citing robustly archived data a. Landscape of issues. b. “Matrix of goodness” - Good/better/best. c. Expert Groups - Virtual help desk. d. Goal: advance capabilities.

2. Use JDDCP implementation guidelines a. Publishers: JATS, workflow, identifiers. b. Repositories: resolvable identifiers, landing pages. c. Identifier services: harmonize. d. Citation managers: new metadata elements.

3. Publicize results. a. Perspective articles. b. Social media. c. Reports from Expert Groups. d. CODATA global seminars.

Data Citation Generic Example example of a data citation as it would appear in a reference list* Author(s), Year, Dataset Title, Data Repository or Archive, [Accession], Global Persistent Identifier, version or subset Principle 2: Credit and Attribution (e.g. authors, repositories or other distributors and contributors) Principle 4: Unique Identifier (e.g. DOI, Handle.). Principle 5, 6 Access, Persistence: A persistent link to a landing page with metadata and access information Principle 7: Version and granularity (e.g. a version number or a query to a subset) In addition, access to versions or subsets should be available from the landing page, *Note that the format is not intended to be defined with this example, as formats will vary across publishers and communities [Principle 8: Interoperability and flexibility].

Project Timeline Evaluation Planning OctJanApr Jul Pilot Kick off Meeting Outreach Phase II (funding dependent)

Good: endorse the JDDCP principles Better—level above and… Plan for adoption of JATS and identify / resolve obstacles Require data deposition by authors in general and/or domain repositories. Obtain accession number from authors, check that data is properly archived. Best:—levels above and… Publish articles w/ cited data using JATS 1.1d3. Incorporate citation info in JATS XML. Properly render JATS data citation in HTML and PDF. All levels: Participate in workshops and discussions Matrix of Goodness: Publishers

Matrix of Goodness: Repositories Good: endorse the JDDCP principles Better—level above and… Reliably archive data Support minimal metadata required for citation Get or provide actionable PIDs (more info later!) Best—levels above and Assign actionable globally unique PIDs Use PIDs that resolve to landing page then to data (via content negotiation, for machines) All levels: Participate in workshops, discussions, expert groups.

Participants And you!

Plan for Today Morning Early adopter panel JATS presentation Equal time for repositories Afternoon Getting to a resolvable ID Break out sessions and planning for action steps

Le mieux est l'ennemi du bien. - Voltaire, Dictionnaire Philosophique, 1770 DCIP Strategy: get started and improve over time.