Rochester Data in Sesame Logging in to Genie to handle 96-well plates

Slides:



Advertisements
Similar presentations
Protein purification in practice Quantification of the procedure –How well did it work? –Did something go wrong? Where? Know how much fumarase is present.
Advertisements

Ameer Effat M. Elfarash Dept. of Genetics Fac. of Agriculture, Assiut Univ. Gene Expression.
Size Exclusion Chromatography
Presented by: Robert O'Brien Training Specialist – Forensic Biology
BISC 220 Lab 2 Protein Purification by Affinity Chromatography & Determination of Specific Activity.
Core domain HPT N-terminal domain H H H H H P H H T H H C-terminal domain H H P H P P H T P P H H T H P T H T T T P P H H P P H P T H H P H P P P P P T.
Bio 98 - Lecture 4 Amino acids, proteins & purification.
Gel filtration Chromatography
Plasmid Isolation RET Summer Overall Picture Plasmid Isolation Remove plasmid pBS 60.6 from DH  E. coli.
DNA: Extraction & Purification By Amr S. Moustafa, M.D.; Ph.D. Assistant Prof. & Consultant, Medical Biochemistry Dept. College of Medicine, KSU
Protein Purification and Analysis Solubility of proteins important for purification: 60-80% soluble, 20-40% membrane Size of proteins varies Some proteins.
Molecular Cell Biology Purifying Proteins Cooper.
Acids and Bases Biotechnology I. Life Chemistry  Based on water  Cells contain 80-90% water  Proper pH essential to ALL living systems Plants cannot.
DNA Extraction And Purification BY Dr. Naglaa Fathy Lecturer of Biochemistry and Molecular Biology, faculty of medicine, Benha university Benha university2008.
How does it actually work?.  Lysis buffers are typically detergents such as sodium dodecyl sulfate (SDS)  What happens if you add dish soap to a frying.
High-throughput screening of HIC media in PreDictor™ plates for capturing a recombinant protein from E.coli Charlotte Brink, Carina Engstrand, Eva Heldin.
Gel filtration chromatography y/college/voet/ /animat ed_figures/ch05/f5-6.html.
Cat # SL Store at 4~23 0 C DiatoCLEAN™ DNA Purification Kit Quick Protocol Small 300 Preps Large 600 Preps Gaither Drive Gaithersburg,
Lab safety Documentation, GLP Practical tips; primers and PCR.
Proteins. You need to know that: Proteins have a variety of functions within all living organisms. The general structure of an amino acid Condensation.
Chapter Five Protein Purification and Characterization Techniques
AC part 1 Aug Affinity Chromatography. AC part 1 Aug What is it used for? Monoclonal and polyclonal antibodies Fusion proteins Enzymes DNA-binding.
Protein Purification and Analysis Solubility of proteins important for purification: 60-80% soluble, 20-40% membrane Size of proteins varies Some proteins.
Developing A Protein Purification Protocol Billie Parker
Workflow of SeMet Protein Preparation Yingyi Fang Haleema Janjua.
Preparing an Overnight Culture of E. coli Possible Problems When there is a mixed culture of red and white (nonexpressing) cells, the white cells.
Workflow Analysis for the Northeast Structural Genomics Consortium at the CABM/Rutgers University/RWJMS Protein Production Facility October 22, 2002 Celia.
Honors Review Questions 47.4 g of propane is combusted in the lab, 17.4 L of product gas was collected at a temperature of 37.1 o C and 734 Torr. What.
Microbial Biotechnology Philadelphia University
Simplicity is the key Continuous purification of monoclonal antibodies L. Landric-Burtin Head of Downstream Processing Development, France Integrated Continuous.
RE digests & RE maps OD and uses Last class How to read a paper Intro to Paper 1.
Plasmids Indispensable tools that allow molecular biologists to obtain essentially unlimited amounts of a DNA sequence Small circular DNA molecules that.
MTT ASSAY Induction of Cell Proliferation by ConA.
Bioseparation Engineering
Proteins separation and analysis using Fast Protein Liquid Chromatography Ayelet David, Ph.D Dept. of Clinical Pharmacology.
Section 15.2 Describing Solution Composition 1. To understand mass percent and how to calculate it 2. To understand and use molarity 3. To learn to calculate.
Antibody Array Assay Report 1. Protocol 2 Protein Extraction 1.Wash the cells with ice cold 1X PBS. 2.Add Lysis Beads and Extraction Buffer to the sample.
Presented by Subproject 6 of the MPEC Roadmap Grant P50 GM Membrane Protein Production for Crystallization Goals, Approach, Progress and Examples.
Logarithmic Functions PRE-CALCULUS UNIT 3: EXPONENTIAL AND LOGARITHMIC FUNCTIONS.
Enzymology Lecture 5 by Rumeza Hanif. Why isolate enzymes? It is important to study enzymes in a simple system (only with small ions, buffer molecules,
Workflow of the Manual Purification of N/NC5-enriched proteins
1 Workflow Analysis of the Protein Purification Process of SeMet Labeled Proteins September 30, 2005 Haleema Janjua.
Protein Purification by Ion Exchange Chromatography
DNA EXTRACTION Chloe Swinfield.
Case study 2. Session outline  A sequential modular approach to solve for a moderate complex flowsheet  Some common unit operations in biochemical industries:
Preparation of Midi-Scale Plasmid DNA from E
Test Weight Apparatus 7/24/08. Test Weight For New Test Select FGIS-927 Test Weight Check Test from Dropdown next to Create New Test To finish an Open.
Protein Overexpression in E. coli and
Protein Overexpression in E
Protein Purification bYSY.
In the name of God. Common Technical Document On Biotech.
Protein Overexpression in E. coli and
TECHNOLOGY TRANSFER BATCH Flutcore’s meeting 12 th April 2016.
Protein Purification Why Purify- Arthur Kornberg Handout Strategy –Starting materials, –Capture, Intermediate Purification, polishing Assays, quantitation.
Bioseparation I Centrifugation. What is Bioseparation?  Purification or separation of a specific material of interest from contaminants in a manner that.
Purification Of Proteins.
Extraction and Determination of Bacterial Proteins.
Chapter 4-3 Chromatography Gel Chromatography Dr Gihan Gawish.
Gel Filtration Chromatography.
Fac. of Agriculture, Assiut Univ.
Proportional Relationships
The common lysis solutions contain A. sodium chloride.
Protein Production Jackpot!
DNA Extraction and Purification
Protein Sample Preparation For NMR Screening
Biochemical Methodology
1st LAB MEETING 김상범.
(a) (b) FhGALE M U I S W1 W2 E1 E2 E3 M - +
Volume 74, Issue 5, Pages (May 1998)
DNA precipitation (Mini-prep)
Presentation transcript:

Rochester Data in Sesame Logging in to Genie to handle 96-well plates

Rochester Data in Sesame Search for plate by owner: select from menu

Rochester Data in Sesame Search by owner for plates: enter, or leave, name

Rochester Data in Sesame Search by owner for plates: expand tree

Rochester Data in Sesame Select workgroup = one step for one plate

Rochester Data in Sesame General info for workgroup: ID, protocol, date...

Rochester Data in Sesame ORFs (Targets): properties and actions

Rochester Data in Sesame Enlarged view of column headers

Rochester Data in Sesame Select wells by position or name to record results

Rochester Data in Sesame Invert selection with 1 click

Rochester Data in Sesame Add action = result or check point

Rochester Data in Sesame Lamp: Large scale cell growth & protein prep Protocol Tree Seleno Methionine (yes or no) Batch ID (starting from 1) Cell Growth : Growth Rate Methods: Temperature, Volume, Medium, Aeration Induction: OD at induction, Final OD, Wet Weight, Expression level (low, whopping, etc) Methods: IPTG, Autoinduction Solubilization : Fraction solubilized Methods: Salt, pH, Detergent, Other Purification : Purity from Columns 1,2,3; Yield as % of original and final mass Methods: For Columns 1,2,3 - Type, Load, Wash, Reaction, Elution Cleavage (yes or no): Percent cleaved Methods: Column or solution stage, Enzyme, solution, Time, Temperature Final Desalting Shipping: Concentration, mg/ml, Buffer To Buffalo: Volume, Temperature To Seattle: Total volume, Volume per tube, Temperature