Erica Lindgren-- MS candidate Committee Members: Barry Rock, Elizabeth Middleton (GSFC), John Aber Anthocyanins as Antioxidants in Trees: Finding a Way.

Slides:



Advertisements
Similar presentations
Crop Canopy Sensors for High Throughput Phenomic Systems
Advertisements

Chlorophyll Estimation Using Multi-spectral Reflectance and Height Sensing C. L. JonesResearch Engineer N. O. Maness Professor M. L. Stone Regents’ Professor.
The LIGHT-DEPENDENT REACTIONS take place within the thylakoid membranes of the grana thylakoid membranes of granum The light dependent reactions begin.
Jan Clevers 1 & Anatoly Gitelson 2 Results optimal band setting for CI red-edge : Coefficient of variation (CV %) of canopy chlorophyll content estimation.
Estimating Anthropogenic Influence in Tropical Forests Using Charcoal Introduction Jessica Del Greco Advisors: Crystal H. McMichael, Earth System Research.
What’s the Dirt on Snow?: The Distribution and Movement of Chemical Impurities in Snow and the Impacts on Albedo Introduction: Snow containing chemical.
Development of Remote Sensing-based Predictive Models for the Management of Taste and Odor Events in Kansas Reservoirs Dr. Mark Jakubauskas Kansas Biological.
TRMM Tropical Rainfall Measurement (Mission). Why TRMM? n Tropical Rainfall Measuring Mission (TRMM) is a joint US-Japan study initiated in 1997 to study.
Spectral Reflectance Curves Lecture 5. When specular reflection occurs, the surface from which the radiation is reflected is essentially smooth (i.e.
REMOTE SENSING Presented by: Anniken Lydon. What is Remote Sensing? Remote sensing refers to different methods used for the collection of information.
2 Remote sensing applications in Oceanography: How much we can see using ocean color? Adapted from lectures by: Martin A Montes Rutgers University Institute.
DROUGHT MONITORING THROUGH THE USE OF MODIS SATELLITE Amy Anderson, Curt Johnson, Dave Prevedel, & Russ Reading.
The Effects of Beech Bark Disease on the Health of American Beech (Fagus grandifolia) Trees in the College Woods Natural Area, Durham, NH Kevin McDermott,
SEASONAL CHANGE Environmental Explorations Mr. Velazquez.
Spectral contrast enhancement
THIS PROJECT HAS RECEIVED FINANCIAL SUPPORT FROM THE EUROPEAN SOCIAL FUND AND FROM GOVERNMENT OF THE CZECH REPUBLIC Michal Kříha Supervisor: Ing. David.
Differences b etween Red and Green NDVI, What do they predict and what they don’t predict Shambel Maru.
Digital Numbers The Remote Sensing world calls cell values are also called a digital number or DN. In most of the imagery we work with the DN represents.
Spectral Characteristics
Lesson 7 Understanding Remote Sensing Technology.
Introduction To describe the dynamics of the global carbon cycle requires an accurate determination of the spatial and temporal distribution of photosynthetic.
Slide #1 Emerging Remote Sensing Data, Systems, and Tools to Support PEM Applications for Resource Management Olaf Niemann Department of Geography University.
Chapter 5 Remote Sensing Crop Science 6 Fall 2004 October 22, 2004.
West Hills College Farm of the Future. West Hills College Farm of the Future Precision Agriculture – Lesson 4 Remote Sensing A group of techniques for.
PREFER 1 st Annual Review Meeting, 5-6 Dec 2013, Milano-Italy PREFER WP 3.2 Information support to Recovery/Reconstruction Task 7 Damage Severity Map PREFER.
GreenSeeker® Handheld Crop Sensor
Remote Sensing. Vulnerability is the degree to which a system is susceptible to, or unable to cope with, adverse effects of climate change, including.
Chapter 4. Remote Sensing Information Process. n Remote sensing can provide fundamental biophysical information, including x,y location, z elevation or.
Electromagnetic Radiation Most remotely sensed data is derived from Electromagnetic Radiation (EMR). This includes: Visible light Infrared light (heat)
Field Measurements of Leaf Mass Area (LMA) in Support of Remote Sensing Studies of a Pacific Northwest Old Growth Forest Canopy Katie Berger (UMASS-Amherst)
PREFER 1 st Annual Review Meeting, 5-6 Dec 2013, Milano-Italy PREFER WP 3.2, Task 7.
Detecting and Monitoring Harmful Algal Blooms on Florida Coast Joseph Tuzzino, Brooklyn Technical High School Jonathan Tien, St. Francis Preparatory Dr.
What is an image? What is an image and which image bands are “best” for visual interpretation?
VQ3a: How do changes in climate and atmospheric processes affect the physiology and biogeochemistry of ecosystems? [DS 194, 201] Science Issue: Changes.
 Introduction  Surface Albedo  Albedo on different surfaces  Seasonal change in albedo  Aerosol radiative forcing  Spectrometer (measure the surface.
Remote Sensing of Vegetation. Vegetation and Photosynthesis About 70% of the Earth’s land surface is covered by vegetation with perennial or seasonal.
NDVI: What It Is and What It Measures Danielle Williams.
Unit Plant Science. Problem Area Managing Plant Growth.
AUTUMN LEAF ABSCISSION
Visual Interpretation Skills
14 ARM Science Team Meeting, Albuquerque, NM, March 21-26, 2004 Canada Centre for Remote Sensing - Centre canadien de télédétection Geomatics Canada Natural.
Spectral response at various targets
3.8 Photosynthesis (Core) State that photosynthesis involves the conversion of light energy into chemical energy State that light from the.
Predicting Current and Future Tree Diversity in the Pacific Northwest I R S S Richard Waring 1 Nicholas Coops 2 1 Oregon State University 2 University.
AGRAR THEMATIC MAPPING - ThemAMap This Project is funded by the Austria Research and Promotion Agency (FFG) Intermediate Project Results.
Hyperspectral remote sensing
State of Engineering in Precision Agriculture, Boundaries and Limits for Agronomy.
Observing Laramie Basin Grassland Phenology Using MODIS Josh Reynolds with PROPOSED RESEARCH PROJECT Acknowledgments Steven Prager, Dept. of Geography.
Beyond Spectral and Spatial data: Exploring other domains of information: 3 GEOG3010 Remote Sensing and Image Processing Lewis RSU.
Interactions of EMR with the Earth’s Surface
NOTE, THIS PPT LARGELY SWIPED FROM
Farms, sensors and satellites. Using fertilisers Farming practice are changing Growing quality crops in good yields depends on many factors, including.
Shadow Detection in Remotely Sensed Images Based on Self-Adaptive Feature Selection Jiahang Liu, Tao Fang, and Deren Li IEEE TRANSACTIONS ON GEOSCIENCE.
Photosynthesis Converts light energy into chemical energy What organisms uses photosynthesis? 6CO 2 + 6H 2 O C 6 H 12 O 6 + 6O 2.
Electromagnetic Radiation
TEMPLATE DESIGN © Abscisic Acid Affects Yield, Antioxidant Capacities, and Phytochemical Contents of Lettuces Grown in.
Monitoring Vegetation Health
Week Fourteen Remote sensing of vegetation Remote sensing of water
Using vegetation indices (NDVI) to study vegetation
Hyperspectral Sensing – Imaging Spectroscopy
STUDY ON THE PHENOLOGY OF ASPEN
OWC/OWRF Use of Sensors and Spectral Reflectance Water Indices to Select for Grain Yield in Wheat Dr. Arthur Klatt Dr. Ali Babar Dr. B. Prasad Mr. Mario.
Radiometric Theory and Vegetative Indices
The Red Edge: Detecting Extraterrestrial Plants
Digital Numbers The Remote Sensing world calls cell values are also called a digital number or DN. In most of the imagery we work with the DN represents.
Spectral Signatures and Their Interpretation
Introduction and Basic Concepts
2.9.U2 Visible light has a range of wavelengths with violet the shortest wavelength and red the longest.
Sources of Variability in Canopy Spectra and the Convergent Properties of Plants Funding From: S.V. Ollinger, L. Lepine, H. Wicklein, F. Sullivan, M. Day.
Photosynthesis and Cellular Respiration
Presentation transcript:

Erica Lindgren-- MS candidate Committee Members: Barry Rock, Elizabeth Middleton (GSFC), John Aber Anthocyanins as Antioxidants in Trees: Finding a Way Towards the Truth

Leaf Pigments Tannins Anthocyanins Carotenoids Chlorophylls

Anthocyanin Roles Temperature regulation Anti-herbivory Anti-fungal UV protection Assist transport of sugars Drought Freezing Modify light within the leaf Potassium deficiency Nitrogen deficiency Phosphorus deficiency Antioxidant

Anthocyanins in Sugar Maple Spring Cyanidin-3- monoglucoside 41% Cyanidin-3-rutinoside 10.5% Cyanidin-3- galloylglucoside 16% Cyanidin-3- galloylrutinoside 1% Delphinidin-3-glucoside 12% Delphinidin-3-rutinoside 17.5% Fall Cyanidin-3- monoglucoside (82%) Cyanidin-3- galloylglucoside (17%) Ji, Shi-bao et al Distribution of Anthocyanins in Aceraceae Leaves. Biochemical Systematics and Ecology. Vol. 20, p

What I am interested to learn… If cyanidin-3-monoglucoside is related to antioxidant power of a sugar maple leaf in the fall Is the predominance of this pigment in the fall due to oxidative stress or providing one of the other functions?

FIA, predictions by 2100

Anthocyanin Detection Inform us about individual stresses Could be used as a general stress indicator Track fall foliage Sugar Maples Environmental conditions affect oxidative stress the most Track fall-to-fall and see if there are long-term trends

Rather than… It would be easier to track anthocyanin concentrations through non-destructive analysis 1. Less time consuming 2. Could track more frequently Which leads to remote sensing of anthocyanins

Gitelson et al Optical properties and nondestructive estimation of anthocyanin content in plant leaves. Photochemistry and photobiology. Vol. 74, p

Rough ARI Comparison

Which might be useful?

Thank you to: The Research and Discover Program Barry Rock, Elizabeth Middleton, John Aber Paul Schaberg and Paula Murakami The authors whose papers are in my desk

Antioxidant Methods Oxygen Radical absorbance capacity TRAP Total oxidant scavenging capacity Chemiluminescence Photochemiluminescen ce Croton or Beta Carotene bleaching Low-density lipoprotein oxidation Ferric reducing antioxidant power Copper reduction assay TEAC/ ABTS DPPH Folin-Ciocalteu

Antioxidant Methods Oxygen Radical absorbance capacity TRAP Total oxidant scavenging capacity Chemiluminescence Photochemiluminescen ce Croton or Beta Carotene bleaching Low-density lipoprotein oxidation Ferric reducing antioxidant power Copper reduction assay TEAC/ ABTS DPPH Folin-Ciocalteu HAT SET HAT/SET

Hypotheses H1-A satellite-derived spectral index will detect and characterize the amount of anthocyanin within sugar and red maple canopies during fall senescence. H2- This satellite-derived spectral index will allow detection and quantification of variations in timing and intensity of fall senescence between 2002 and 2008.

Objectives Determine anthocyanin concentration range for sugar and red maple, including how this concentration affects spectral characteristics. Ten trees will be tested throughout the season as senescence occurs. Determine spectral characteristics though analysis with the VIRIS. Determine leaf color visually using Munsell’s color chart and digitally photograph leaves. Determine chlorophyll and anthocyanin concentrations spectrophotometically. For testing red maples, an additional site may be required.

Objectives Find best estimation of anthocyanin by comparing results from lab experiments (yielding anthocyanin concentrations) to modeled MODIS/MERIS bands from the VIRIS (giving spectral anthocyanin estimations). These results can then be compared to actual MODIS/MERIS imagery obtained throughout the fall. Compare anthocyanin concentrations from lab experiments to spectral signature obtained through VIRIS. Apply and analyze optimized relationships from the MODIS/Hyperion/MERIS investigation (see objective 3). Compare to actual anthocyanin concentrations. Compare modeled band results (within known deviation from actual anthocyanin concentrations) to values from MODIS and MERIS imagery obtained during the fall.

Objectives Compare Hyperion image with MODIS and MERIS images acquired on the same day to identify differences in the electromagnetic signature. By comparing the sensors the best optimization of the ARI can be determined. These images will be similarly manipulated in terms of methods for removing effects from clouds, shadows, and aerosols. Compare images in 550nm range for both land and ocean bands in MODIS, MERIS and Hyperion. Compare images in 700nm range for both land and ocean bands in MODIS, MERIS and Hyperion. Distinguish other areas for chlorophyll signature in both MODIS land and ocean bands and MERIS by viewing differences in a) other wavelengths, b) chlorophyll florescence, and c) red edge parameters.

Objectives Track temporal changes in spectrally-deduced anthocyanin concentrations over a number of years and compare to possibly environmental influences such as temperature, date of first killing frost, ozone concentrations, rainfall, etc. (See contingency plan).

Some additional thoughts… I think that MERIS will work best due to band placement. I would like to focus on using this rather than MODIS or Landsat, but I would still compare field data to see potential of these systems. Keep comparison to Hyperion. MERIS also has good placement for carotenoid estimation (focus on sugar maple). If I focused on MERIS I could possible estimate this as well. Ideal = (R480 or R500 – R678)/R800 Band 8, nm, 7.5 nm Band 3, 490 nm, 10nm Band 12, 775 nm, 15nm

Detection is possible

Reduced Resolution Full Resolution

Issues Homogeneity for field study Size of pixels Number of useable images Sugar maple or red maple or both Anthocyanin only or carotenoids as well

Questions?