BioPSE Examples NCRR BioPSE Examples: Networks, Datasets, Tutorials, and PowerApps.

Slides:



Advertisements
Similar presentations
User Interface design Teppo Räisänen
Advertisements

Open XML SDK for Microsoft Office
ParaView Tutorial Greg Johnson, Karla Vega. Before we begin… Make sure you have ParaView installed so you can follow along in the lab section –
Slicer Welcome Tutorial
Lecture 15 Graphical User Interfaces (GUI’s). Objectives Provide a general set of concepts for GUI’s Layout manager GUI components GUI Design Guidelines.
21-1 Physics I Class 21 Thinking About Electric Fields and Electric Potential.
S. Mandayam/ EEMAG-1/ECE Dept./Rowan University Engineering Electromagnetics Fall 2004 Shreekanth Mandayam ECE Department Rowan University.
Diffusion Tensor Imaging (DTI) is becoming a routine technique to study white matter properties and alterations of fiber integrity due to pathology. The.
Web-based Portal for Discovery, Retrieval and Visualization of Earth Science Datasets in Grid Environment Zhenping (Jane) Liu.
System Overview CIBC SCIRun / BioPSE System Overview.
Demo Guidelines Lesson 9. Modules 9.1Demo Video Guidelines 9.2Begin Filming Pitch Video 9.3Continue working on prototype.
Advanced BioPSE NCRR Dynamic Compilation Joint Session #1: Advanced BioPSE/SCIRun.
 Post-Processor Feature  Post-Processor Feature New Graphic Engine General Section  Pre-Processor Feature  Pre-Processor Feature Visualization Designer.
Human-computer interfaces. Operating systems are software (i.e. programs) used to control the hardware directly used to run the applications software.
Introduction to Windows Programming
DICOM to NRRD Conversion Tutorial Martin Styner 1 University of North Carolina Neuro Image Research and Analysis Lab.
1 Architecture of Network Management Simulator S. Yukita Hosei University Created: Oct. 26, 2000 Revised: Nov. 2, 2000.
HP Overview. HP Overview is a family of integrated network and system management solution for managing the complete IT enterprises, including networks,
Object-Oriented Design Simple Program Design Third Edition A Step-by-Step Approach 11.
NIH NCRR Overview The SCIRun and BioPSE Problem Solving Environments Chris Johnson, Rob MacLeod, and David Weinstein Scientific Computing and Imaging Institute.
Introduction NCRR Welcome!!. Introduction NCRR Workshop Goals Make you useful to SCIRun/BioPSE and map3d Make SCIRun/BioPSE and map3d useful to you! Send.
NA-MIC National Alliance for Medical Image Computing National Alliance for Medical Image Computing: NAMIC Ron Kikinis, M.D.
Introduction to ArcGIS for Environmental Scientists Module 3 – GIS Analysis Model Builder.
Network Analyst in ArcGIS Pro Scott Sandusky. Network Analyst in ArcGIS Pro This session covers how to use Network Analyst in ArcGIS Pro. It will also.
FacultyInformation Exchange ECC ‘14. New Enterprise Computing Minor 21 credits total…. CMPT120 Introduction to Programming (4 cr) CMPT220 Software Development.
Representing and Processing Scientific Data with Teem: Applications to CT and DT-MRI Gordon Kindlmann Representing and Processing Scientific Data with.
Developer Session #3 NCRR Advanced SCIRun/BioPSE Elements: GUIs, Core Libs, Contributions & Support.
Ke Li. Agenda Introduction User Identification Features of the Tutorial What I Have Learned Demo.
NIH NCRR Overview Introduction to NCRR Center NCRR Center for Bioelectric Field Modeling, Simulation, and Visualization.
NA-MIC National Alliance for Medical Image Computing Process-, Work-Flow in Medical Image Processing Guido Gerig
Introduction to the IRRIIS Simulation SimCIP Césaire Beyel.
NA-MIC National Alliance for Medical Image Computing Diffusion Tensor Imaging tutorial Sonia Pujol, PhD Surgical Planning Laboratory.
Future NCRR The Future of SCIRun and BioPSE. Future NCRR 6 Months Ago: The Next 12 Months Preparing for Renewal: Users & Pubs Usability Domains UI wrapping.
BioPSE NCRR SCIRun2 -THE PROJECT -OBJECTIVES -DEVELOPMENTS -TODAY -THE FUTURE.
Visualization with ParaView. Before we begin… Make sure you have ParaView 3.14 installed so you can follow along in the lab section –
CS 772: Global Knowledge Networks V. “Juggy” Jagannathan CSEE, West Virginia University Feb 18, 2002.
Top Secret CIBC Sneak Preview of Next Generation SCIRun Features and Directions.
BioPSE Elements NCRR Elements of SCIRun and BioPSE.
Mountaintop Software for the Dark Energy Camera Jon Thaler 1, T. Abbott 2, I. Karliner 1, T. Qian 1, K. Honscheid 3, W. Merritt 4, L. Buckley-Geer 4 1.
Infrastructure InfrastructureInfrastructure Utah CIBC EAB Meeting 2008.
Makeig-Worrell NCRR Project Overview Scott Makeig, Ph.D. is the Director of the Swartz Center for Computational Neuroscience Institute for Neural Computation.
Collaboration with Craig Henriquez’ laboratory at Duke University Multi-scale Electro- physiological Modeling.
NCRR Future Utah NCRR Future Plans: Discussion. NCRR Future New Personnel Information Carsten Wolters (SCI Postdoc) Frank Sachse (BE Faculty) Mike Kirby.
Sim & Model Simulation and Mathematical Modeling Core Rob MacLeod and Dana Brooks.
ECG Simulation NCRR Overview Technology for the ECG Simulation project CardioWave BioPSE project background Tools developed to date Tools for the next.
Mouse ECG (Tech) NCRR Overview Technology for the “Mouse ECG” project CardioWave BioPSE project background Tools developed to date Tools for the next phase.
Tikhonov Example NCRR BioPSE Example: Designing and Implementing A Tikhonov Regularization Network BioPSE Example: Designing and Implementing A Tikhonov.
Visualization for astronomy, via medical imaging Michael Halle Initiative in Innovative Computing at Harvard & Surgical Planning Lab, Brigham and Women’s.
VisIt Project Overview
Windows Programming Environments
Office Add-ins Intro and Development
Contributing Code to SCIRun / BioPSE
MS Access Introduction Database Design.
Unit 3 Lesson 4 & 5- Programming With Simple Commands / Creating Functions Day 26.
BioPSE/map3d Workshops
Backround and Concepts for SCIRun and BioPSE
Building Graphical User Interface with Swing a short introduction
Joint Session #1: Advanced
Overview of the SCIRun/BioPSE Software Systems
Introduction UI designer stands for User Interface designer. UI designing is a type of process that is used for making interfaces in the software or the.
How to stop Fortran programming problems at the source
The SCIRun and BioPSE Problem Solving Environments
How to stop C programming problems at the source
5.4 – Complex Numbers.
Who Wants to be an Equationaire?. Who Wants to be an Equationaire?
05 | Desktop Applications
Main achievements of WP10.1: Benthic modules
Human–computer interfaces
Introduction to Scientific Visualization
ArcGIS Pro: An Introduction Overview
Presentation transcript:

BioPSE Examples NCRR BioPSE Examples: Networks, Datasets, Tutorials, and PowerApps

BioPSE Examples NCRR Example Networks (Nets) Located in SCIRun/src/{PKG}/nets/ Major nets (applications) Minor nets (module demos)

BioPSE Examples NCRR build-fem-elem-leadfield.net

BioPSE Examples NCRR dipole-localization-leadfield-vis.net

BioPSE Examples NCRR build-misfit-and-localize.net

BioPSE Examples NCRR Example Networks (Nets) Located in SCIRun/src/{PKG}/nets/ Major nets (applications) Minor nets (module demos)

BioPSE Examples NCRR showmatrix.net

BioPSE Examples NCRR show-text.net

BioPSE Examples NCRR Example Datasets

BioPSE Examples NCRR SCIRun/BioPSE Tutorial Introduction to SCIRun/BioPSE for new users Dataflow Programming SCIRun Architecture Common Modules Datatypes Introduction to SCIRun/BioPSE for new users Dataflow Programming SCIRun Architecture Common Modules Datatypes

BioPSE Examples NCRR SCIRun/BioPSE Tutorial Introduction to SCIRun/BioPSE for new users Dataflow Programming SCIRun Architecture Common Modules Datatypes Introduction to SCIRun/BioPSE for new users Dataflow Programming SCIRun Architecture Common Modules Datatypes Get the user comfortable in the SCIRun/BioPSE environment

BioPSE Examples NCRR SCIRun/BioPSE Tutorial I llustrates practical application of SCIRun/BioPSE Solve the bioelectric finite element forward problem Allow the user to visualize the electric field I llustrates practical application of SCIRun/BioPSE Solve the bioelectric finite element forward problem Allow the user to visualize the electric field BioPSE Package forward-fem.net

BioPSE Examples NCRR Power Apps Problem specific applications Hide the complexities of dataflow Provide a simplified graphical user interface Focus on a specific Problem specific applications Hide the complexities of dataflow Provide a simplified graphical user interface Focus on a specific task

BioPSE Examples NCRR Power Apps Guide the user through specific processing steps Processing Pane

BioPSE Examples NCRR Power Apps Provide different visualization options Visualization Pane

BioPSE Examples NCRR BioFEM Encapsulation of the forward-fem network Change datasets Streamlines Isosurfaces Electrodes Change datasets Streamlines Isosurfaces Electrodes

BioPSE Examples NCRR BioTensor Diffusion Tensor Imaging Processing Steps Data Acquisition Registration Building Tensors Visualization Options Diffusion Tensor Imaging Processing Steps Data Acquisition Registration Building Tensors Visualization Options Planes Isosurfaces Planes Isosurfaces Glyphs Fibers Glyphs Fibers

BioPSE Examples NCRR BioTensor Diffusion Tensor Imaging Processing Steps Data Acquisition Registration Building Tensors Visualization Options Diffusion Tensor Imaging Processing Steps Data Acquisition Registration Building Tensors Visualization Options Planes Isosurfaces Planes Isosurfaces Glyphs Fibers Glyphs Fibers

BioPSE Examples NCRR BioTensor Diffusion Tensor Imaging Processing Steps Data Acquisition Registration Building Tensors Visualization Options Diffusion Tensor Imaging Processing Steps Data Acquisition Registration Building Tensors Visualization Options Planes Isosurfaces Planes Isosurfaces Glyphs Fibers Glyphs Fibers

BioPSE Examples NCRR Power App Benefits Hides a large network

BioPSE Examples NCRR Power App Benefits Simplifies the GUI