Noise reduction and addition in sensory-motor processing Stephen G. Lisberger Howard Hughes Medical Institute Department of Physiology, UCSF.

Slides:



Advertisements
Similar presentations
Example Project and Numerical Integration Computational Neuroscience 03 Lecture 11.
Advertisements

Evaluating which classifiers work best for decoding neural data.
What is the neural code?. Alan Litke, UCSD Reading out the neural code.
The linear/nonlinear model s*f 1. The spike-triggered average.
Institute for Theoretical Physics and Mathematics Tehran January, 2006 Value based decision making: behavior and theory.
Solving Equations = 4x – 5(6x – 10) -132 = 4x – 30x = -26x = -26x 7 = x.
Neuronal Coding in the Retina and Fixational Eye Movements Christian Mendl, Tim Gollisch Max Planck Institute of Neurobiology, Junior Research Group Visual.
What is the language of single cells? What are the elementary symbols of the code? Most typically, we think about the response as a firing rate, r(t),
Reading population codes: a neural implementation of ideal observers Sophie Deneve, Peter Latham, and Alexandre Pouget.
Computer Vision - A Modern Approach Set: Linear Filters Slides by D.A. Forsyth Differentiation and convolution Recall Now this is linear and shift invariant,
Rules for means Rule 1: If X is a random variable and a and b are fixed numbers, then Rule 2: If X and Y are random variables, then.
Chapter 5 Human Heredity by Michael Cummings ©2006 Brooks/Cole-Thomson Learning Chapter 5 Complex Patterns of Inheritance.
Levels in Computational Neuroscience Reasonably good understanding (for our purposes!) Poor understanding Poorer understanding Very poorer understanding.
Clustered or Multilevel Data
How does the mind process all the information it receives?
Rohit Ray ESE 251. What are Artificial Neural Networks? ANN are inspired by models of the biological nervous systems such as the brain Novel structure.
13.7 – Graphing Linear Inequalities Are the ordered pairs a solution to the problem?
What are we trying to explain? Multiple facets of a simple behavior Stephen G. Lisberger Howard Hughes Medical Institute W.M. Keck Center for Integrative.
Department of Information Technology Indian Institute of Information Technology and Management Gwalior AASF hIQ 1 st Nov ‘09 Department of Information.
Normal Brain Images: Brain cross sections: Horizontal through the top of the skull: medlib.med.utah.edu/WebPath/HISTHTML/ANATOMY/VHM1080R.html.
Sampling and Nested Data in Practice- Based Research Stephen Zyzanski, PhD Department of Family Medicine Case Western Reserve University School of Medicine.
Phase synchronization in coupled nonlinear oscillators
Active Vision Key points: Acting to obtain information Eye movements Depth from motion parallax Extracting motion information from a spatio-temporal pattern.
Eye movements: Lab # 1 - Catching a ball. How do we use our eyes to catch balls? What information does the brain need? Most experiments look at simple.
3.5 – Solving Systems of Equations in Three Variables.
STUDY, MODEL & INTERFACE WITH MOTOR CORTEX Presented by - Waseem Khatri.
Chapter 18: Sampling Distribution Models AP Statistics Unit 5.
Evolving Virtual Creatures & Evolving 3D Morphology and Behavior by Competition Papers by Karl Sims Presented by Sarah Waziruddin.
CS344: Introduction to Artificial Intelligence (associated lab: CS386) Pushpak Bhattacharyya CSE Dept., IIT Bombay Lecture 31: Feedforward N/W; sigmoid.
1 Lecture #4 Calculus of Variation and Euler-Lagrange Equation Lecture #4 Hossam Abdelmunim 1 & Aly A. Farag 2 1 Computer & Systems Engineering Department,
Do Now The ratio of men to women on a cruise is 6 to 8. If there are 168 people on the cruise, how many women are there?
What is the neural code?. Alan Litke, UCSD What is the neural code?
Correlation tells us about strength (scatter) and direction of the linear relationship between two quantitative variables. In addition, we would like to.
4.8 – Solving Equations with Fractions
Direct Variation Equation for direct variation:. Page 6 Steps: 1.Set up a proportion 2.Cross multiply and solve for variable Since x varies directly as.
Reaction time correlations as a measure of eye-hand coordination Heather Dean Pesaran Lab Center for Neural Science New York University.
Neural Networks: Part 2 Sensory Motor Integration I. Sensory-motor (S-M) Coordination Problem II. Physiological Foundations III. S-M Computation: Tensor.
Brain-Machine Interface (BMI) System Identification Siddharth Dangi and Suraj Gowda BMIs decode neural activity into control signals for prosthetic limbs.
Two Mean Neuronal Waveforms Distribution of Spike Widths Interaction of Inhibitory and Excitatory Neurons During Visual Stimulation David Maher Department.
Copyright © 2005 Brooks/Cole, a division of Thomson Learning, Inc Chapter 17 Simple Linear Regression and Correlation.
Information Processing by Neuronal Populations Chapter 6: Single-neuron and ensemble contributions to decoding simultaneously recoded spike trains Information.
Does the brain compute confidence estimates about decisions?
Date of download: 6/28/2016 Copyright © 2016 American Medical Association. All rights reserved. From: Teamwork Matters: Coordinated Neuronal Activity in.
Ch 7. Computing with Population Coding Summarized by Kim, Kwonill Bayesian Brain: Probabilistic Approaches to Neural Coding P. Latham & A. Pouget.
Spatial and Temporal Encoding for a PSN
CSC2535: Computation in Neural Networks Lecture 11 Extracting coherent properties by maximizing mutual information across space or time Geoffrey Hinton.
Scientific Method.
Physiological Psychology
Spontaneous activity in V1: a probabilistic framework
The origins of motor noise
Signal, Noise, and Variation in Neural and Sensory-Motor Latency
Volume 66, Issue 6, Pages (June 2010)
Matias J. Ison, Rodrigo Quian Quiroga, Itzhak Fried  Neuron 
Experimental Design: The Basic Building Blocks
Cortical Mechanisms of Smooth Eye Movements Revealed by Dynamic Covariations of Neural and Behavioral Responses  David Schoppik, Katherine I. Nagel, Stephen.
Volume 66, Issue 4, Pages (May 2010)
Scientific Method.
CORRELATION AND MULTIPLE REGRESSION ANALYSIS
Solving Equations with Variables on Both Sides
Solving Equations with Variables on Both Sides
Sensory Population Decoding for Visually Guided Movements
Notes Over 2.4 Writing an Equation Given the Slope and y-intercept
TWO STEP EQUATIONS 1. SOLVE FOR X 2. DO THE ADDITION STEP FIRST
IMPLICIT Differentiation.
Jude F. Mitchell, Kristy A. Sundberg, John H. Reynolds  Neuron 
Encoding of Stimulus Probability in Macaque Inferior Temporal Cortex
Adaptive Rescaling Maximizes Information Transmission
What do our results say about the comparison of different brain states
Decomposing the motor system
Chapter Ten: Designing, Conducting, Analyzing, and Interpreting Experiments with Two Groups The Psychologist as Detective, 4e by Smith/Davis.
Presentation transcript:

Noise reduction and addition in sensory-motor processing Stephen G. Lisberger Howard Hughes Medical Institute Department of Physiology, UCSF

Can we learn something important by analyzing trial-by-trial variation? We know that the responses of single neurons vary substantially across identical trials. We want to understand how the brain deals with the variation across many neurons on one trial. We want to know about noise reduction and noise addition at each level of sensory-motor processing. Noise reduction depends on the degree of independence of neural responses across the population (R NN ) Downstream noise addition (  2 DS ) depends on lots of factors

Can we learn something important by analyzing trial-by-trial variation? What can we measure? Trial-by-trial variation in responses of individual neurons (  2 FR ) Trial-by-trial variations in behavioral outputs (  2 EYE ) Correlations between trial-by-trial variations in neural responses and behavior (R NB ) To some degree, correlations between trial-by-trial variations in responses of pairs of neurons (R NN ) How do we get from what we can measure to what we want to know?

Two simple intuitions Higher correlations between neurons in the population lead to higher neuron-behavior correlations -- less noise reduction More noise added downstream leads to lower neuron-behavior correlations (These intuitions break if the population of neurons is really small)

Equations that make these intuitions concrete Variance reduction Neuron-behavior correlations (These are for large numbers of neurons in the population)

Solving the equations allows us to compute what we want to know from what we can measure Noise added downstream Neuron-neuron correlations

Smooth pursuit eye movements

Pursuit is somewhat variable

Neural responses are variable, too

Target velocity Eye velocity

Neural responses are variable, too Target velocity Eye velocity

What we can measure in single unit recordings Noise reduction between neuron and behavior Neuron-behavior correlations (To make these measurements meaningful in an absolute sense, we derive a surrogate of eye movement with the units of firing rate, spikes/s.)

What we can measure in single unit recordings Noise reduction between neuron and behavior Neuron-behavior correlations

Surrogate of eye movement (spikes/s)

Measurements from the data

Recall the equations that allow us to compute what we want to know from what we can measure Noise added downstream Neuron-neuron correlations

Neuron- neuron correlations Downstream noise

The bigger picture Neural population Decoding Behavior FR,  2 FR, R NN, N , Avg, VAvg, …  2 DS, C/Dvergence  2 EYE, R NB

The bigger picture Neural population Decoding Neural population Behavior FR,  2 FR, R NN, N , Avg, VAvg, …  2 DS, C/Dvergence  2 EYE, R NB FR,  2 FR, R NN, N

Collaborators Leslie Osborne Javier Medina Bill Bialek Research supported by the Sloan and Swartz Foundations, the Howard Hughes Medical Institute, the National Eye Institute, the National Institute for Neurological Disease and Stroke, and the National Institute for Mental Health