VAMDC infrastructure VAMDC 7th Developer’s workshop Guy Rixon.

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Presentation transcript:

VAMDC infrastructure VAMDC 7th Developer’s workshop Guy Rixon

Project goals Easier to get data out of DBs Easier to read data got from DBs Easier to make new DBs

“ Easier to get data out of DBs” Everything on the WWW Queryable via the web Common terms for query Single UI for all DBs

“Easier to read data got from DBs” Same format for all DBs: XSAMS Self-describing: lots of metadata Inclusive and general: Can express most data Leave out the parts that don’t apply

“Easier to make new DBs” Tools provided to ingest data from ASCII Code provided to connect DBs to WWW Guidelines to schema of DBs

WWW Web-service network Web browser GUI application Script Modelling code Data service

WWW One service per DB Data service (“Node Software”) Data service (“Node Software”) e.g.VALDChiantiHITRANCDMS Application Data service (“Node Software”) Data service (“Node Software”) Data service (“Node Software”) Data service (“Node Software”) Data service (“Node Software”) Data service (“Node Software”)

Data URLs koeln.de:8090/DjCDMS/tap/sync?REQUEST=doQuery&LANG=VSS1&FORMAT=X SAMS &QUERY=SELECT+ALL+WHERE+MoleculeStoichiometricFormula+%3D+%27CO %27QUERY=SELECT+ALL+WHERE+MoleculeStoichiometricFormula+%3D+%27CO %27 The address of the service (this one for CDMS) The data to be extracted Call these with HTTP GET

Service model Application Data service VAMDC -TAP Query in VSS1/VSS2 Results in XSAMS HTTP VAMDC-TAP VSS1/2XSAMS Dictionary

HTTP HEAD for preview Choose query HTTP HEAD (quick) HTTP HEAD (quick) These numbers; no data These numbers; no data HTTP HEAD (slow) HTTP HEAD (slow) Data

UI = web portal Data service Web portal VAMDC- TAP Query in VSS1/VSS2 Results in XSAMS Web browser WWW Sciencey Geeky

Application VAMDC registry IVOARegistryIVOARegistry Query in XQuery Metadata in XML Which nodes, and where? Description Owner contact Service URL Version of standards Version of node software Sample queries “Returnables”: returned in a query “Restrictables”: constrained in query {

XSAMS consumers Web portal VAMDC registry Consumer web-service Consumer web-service Visualizations Mergers Filtered XSAMS Other formats Look up services Data service Find data (HEAD) Load data (GET) Data URLs (These still to be made - see later in this w/s) Consumer web-service Consumer web-service Consumer web-service Consumer web-service

Connecting your code: 1 1. Select data using VAMDC portal 2. Download data to desktop using portal 3. Possibly translate to other format using XSAMS-consumer service 4. Run your code on downloaded/translated data

Connecting your code: 2 Get data URLs, possibly from portal Adapt/wrap your code to call those URLs directly

Connecting your code: 3 Adapt your code to find VAMDC nodes via VAMDC registry ⇒ no need to use VAMDC portal

Connecting your code: 4 1. Write an XSAMS-consumer service that runs your code 2. Publish the service 3. Users can then route data direct from portal to your code