MALDI demonstration Frímann, Helgi, Long, Nanna. Sample preperation The sample of interest and matrix are dissolved in a volatile solvent The sample/matrix/solvent.

Slides:



Advertisements
Similar presentations
Mass Spectrometry of Proteins and Peptides Electrospray Ionization(ESI) and Matrix Assisted Laser Desorption Ionization(MALDI) by Matt Fisher.
Advertisements

Mass Spectrometry Chem 3500 Mass Spectrometry Y. Zhao Lecture 2 A Glimpse of Mass Spectrometry Began from 1920s: Aston, Dempster, Thompson MS is often.
FC-MS from Teledyne Isco CombiFlash ® a Name You Can Rely On.
Mass Spectrometry Mass spectrometry involves ionizing a compound, separating the ions that result on the basis of mass to charge ratio (m/z) and obtaining.
12-1 Molecular Mass Spectroscopy Molecular structure Composition of mixtures Molecular mass spectra Ion Source Mass Spectrometers Applications.
Evaluation of Peptides in Wisconsin Beer Mckenna L. Missfeldt, Dr. Jennifer Grant, University of Wisconsin-Stout Abstract Matrix-assisted laser desorption/ionization.
Analyzing Biological and Organic Polymers by MALDI-TOF Jonathan A. Karty, Ph.D.
Lecture 9. MALDI/TOF. Introduction Matrix-assisted laser desorption/ionization (MALDI) is a soft ionization technique used in mass spectrometry, allowing.
Peptide Mass Fingerprinting
Mass Spectrometry in the Biosciences: Introduction to Mass Spectrometry and Its Uses in a Company Like Decode. Sigurður V. Smárason, Ph.D. New Technologies.
LC-MS Based Metabolomics. Analysing the METABOLOME 1.Metabolite Extraction 2.Metabolite detection (with or without separation) 3.Data analysis.
Modern techniques for structure determination of organic compounds include: Mass spectrometry Size and formula of the compound Infrared spectroscopy Functional.
Lecture 18 Mass Spectroscopy I Harris Ch.22.
PROTEIN IDENTIFICATION BY MASS SPECTROMETRY. OBJECTIVES To become familiar with matrix assisted laser desorption ionization-time of flight mass spectrometry.
Atomic Mass Spectrometry
Molecular Mass Spectrometry
Mass Spectroscopy Quantitative Chemical Analysis Harris, 6th Edition
Proteomics Informatics – Overview of Mass spectrometry (Week 2) Ion Source Mass Analyzer Detector mass/charge intensity.
Proteomics Informatics – Overview of Mass spectrometry (Week 2)
Mass spectrometry and the PITZ Sven Lederer Technisches Seminar
Molecular mass spectrometry Chapter 20 The study of “molecular ions” M + e -  M e -
Mass Spectrometry Mass spectrometry involves ionizing a compound, separating the ions that result on the basis of mass to charge ratio (m/z) and obtaining.
Chapter 20 # 4, 5, 12, 13, 16. Fig (p.551) Mass spectrum of ethyl benzene Fragment peaks Unit: amu or dalton Fragment peaks.
Marvin Vestal and Kevin Hayden SimulTOF Systems
INF380 - Proteomics-51 INF380 – Proteomics Chapter 5 – Fundamentals of Mass Spectrometry Mass spectrometry (MS) is used for measuring the mass-to-charge.
High throughput Protein Measurement Techniques Harin Kanani.
Ionization energy?. Ionization energy? EI Ionization??
Tunable Infrared Laser Desorption/Ionization Time-of-Flight Mass Spectroscopy of Thin Films Timothy Cheng, Michael Duncan Department of Chemistry, University.
Mass Spectrometry Instrumentation: Ionization methods and analyzers.
CHM 312 Fall 2008 Special Topics in MS Dr. Ralph Mead.
Separates charged atoms or molecules according to their mass-to-charge ratio Mass Spectrometry Frequently.
Methodology for Molecular weight determination by MALDI instrumentation One of the application of MALDI is for the determination of the molecular weight.
2014 생화학 실험 (1) 6주차 실험조교 : 류 지 연 Yonsei Proteome Research Center 산학협동관 421호
What is Mass Spectrometry? Mass spectrometry could be considered as an analytical technique that involves the study in the gas phase of ionized molecules.
Magnetic sector Ion trap MASS Analyzer Ion trap analyser. Ions are either created within or rapidly infected into the trap. The electrostatic field forces.
Chapter 11 Structure Determination: Mass Spectrometry, Infrared Spectroscopy, and Ultraviolet Spectroscopy.
Yonsei Proteome Research Center Peptide Mass Finger-Printing Part II. MALDI-TOF 2013 생화학 실험 (1) 6 주차 자료 임종선 조교 내선 6625.
Peptide Mass Finger-Printing Part II. MALDI-TOF
CHEM133 Mass Spectrometry: Lecture 1
Ionization techniques, Mass spectra and MS-Instrumentation
Mass Spectrometry 101 (continued) Hackert - CH 370 / 387D
Lecture 7 Analysis of Proteins.
Proteomics Informatics – Overview of Mass spectrometry (Week 2)
MALDI-TOF MS Bergdís Björk Bæringsdóttir Daníel Arnar Tómasson
Chem. 133 – 4/13 Lecture.
Mass Spectrometry 101 Hackert - CH 370 / 387D
Learning Objectives (12.1)
Mass Spectrometry Mass spectrometry involves ionizing a compound, separating the ions that result on the basis of mass to charge ratio (m/z) and obtaining.
Mass Spectrometry Obaid M. Shaikh.
An Introduction to the ProteinChip® Reader
Mass Spectrometry Courtesy
S. Emonet, H.N. Shah, A. Cherkaoui, J. Schrenzel 
Time-of-Flight Mass Analyzers
Chapters 11&20 Mass Spectrometry 1 Mass Spectrometry
Matrix-assisted laser desorption ionization time-of-flight mass spectrometry, a revolution in clinical microbial identification  A. Bizzini, G. Greub 
Schematic of the principles of mass spectrometry (MS).
12. Structure Determination: Mass Spectrometry and Infrared Spectroscopy Based on McMurry’s Organic Chemistry, 7th edition.
12. Structure Determination: Mass Spectrometry and Infrared Spectroscopy Based on McMurry’s Organic Chemistry, 7th edition.
12. Structure Determination: Mass Spectrometry and Infrared Spectroscopy Based on McMurry’s Organic Chemistry, 7th edition.
Figure 1 Schematic representation of a typical MALDI-MSI workflow
Mass spectrometry Detection of ionic species to determine the molecular weight of and obtain structural information on a molecule.
Detection of microorganisms in blood specimens using matrix-assisted laser desorption ionization time-of-flight mass spectrometry: a review  M. Drancourt 
S. Emonet, H.N. Shah, A. Cherkaoui, J. Schrenzel 
12. Structure Determination: Mass Spectrometry and Infrared Spectroscopy Based on McMurry’s Organic Chemistry, 7th edition.
12. Structure Determination: Mass Spectrometry and Infrared Spectroscopy Based on McMurry’s Organic Chemistry, 7th edition.
Mass Spectrometry THE MAIN USE OF MS IN ORG CHEM IS:
Advantages and limitations of genomics in prokaryotic taxonomy
Department of Chemistry St. Joseph’s College (Autonomous)
M.Prasad Naidu MSc Medical Biochemistry, Ph.D,.
General schematic for MS analysis of ionized microbiological isolates and clinical material. General schematic for MS analysis of ionized microbiological.
Presentation transcript:

MALDI demonstration Frímann, Helgi, Long, Nanna

Sample preperation The sample of interest and matrix are dissolved in a volatile solvent The sample/matrix/solvent mixture is then spotted on a metal plate When the solvent has evaporated you can put your plate in to the vacuum Anchor chips have hydrophilic area surrounded by hydrophobic ring

Matrix Assisted Laser Desorption/ Ionization Introduced by M. Karas and F. Hillenkamp in 1985 [1] Mainly used for large molecules Soft ionization The vibrational energy added to the analyte molecule is about 4eV [2] The ions formed are typically: [M+H] +, [M+Na] +, [M+K] +, [M+NH 4 ] + or [M-H] - Ionization mechanism is not fully understood

TOF mass spectrometer A TOF MS is usually (always?) used with MALDI Reflectron TOF MSMS Microchannel plate electron multiplier (10000 electrons for each ion) MALDI-TOF “records”: ~ amu, attomoles of material

Electron multiplier

Measurements The data we have is from the protein BSA (Bovine serum albumin) We took linear spectra in the demostration Got the data from the peak at 927amu in MSMS mode

References [1] Karas, M.; Bachmann, D.; Hillenkamp, F. (1985). "Influence of the Wavelength in High-Irradiance Ultraviolet Laser Desorption Mass Spectrometry of Organic Molecules".Anal Chem 57: 2935–9 [2] I. Bald, J. Kopyra and E. Illenberger, Angewandte Chemie-International Edition 45 (29), (2006).