Insights into carbon assimilation in ectomycorrhizal fungi through use of 13 C-labeled glucose and amino acids Megan Grass 1, Janet Chen 2, Andrew Ouimette.

Slides:



Advertisements
Similar presentations
CHAPTER 20 PROTEIN METABOLISM. Nitrogen of Amino Acids nitrogens to be excreted are collected in glutamate which is oxidized to  -ketoglutarate and NH.
Advertisements

Can microbial functional traits predict the response and resilience of decomposition to global change? Steve Allison UC Irvine Ecology and Evolutionary.
Quantifying carbon allocation to mycorrhizal fungi by temperate forest tree species across a nitrogen availability gradient Shersingh Joseph Tumber-Davila.
Nitrogen Mineralization Across an Atmospheric Nitrogen Deposition Gradient in Southern California Deserts Leela E. Rao 1, David R. Parker 1, Andrzej Bytnerowicz.
Fungal feedbacks on global change Kathleen Treseder Jennifer Lansing Nathan Choi Univ. of California Irvine.
Quantifying carbon allocation to mycorrhizal fungi by temperate forest tree species across a nitrogen availability gradient Shersingh Tumber-Davila 1,
The saprotrofic food chain in terrestrial ecosystems : Soil Biota What controls the community / food web structure? Top-down or bottom-up? (predation or.
MODELING AMMONIA REMOVAL FROM AMMONIA SUPPLEMENTED BREWERY WASTEWATER By Julie E. Smith 1 and Linda A. Figeuroa 2 1 – Coors Brewing Company, 2 – Colorado.
1 Metabolism of Lipids and Proteins Chapter 35 Hein and Arena Colleen Kelley Chemistry Department Pima Community College © John Wiley and Sons, Inc. Version.
; ; Mycorrhizal Type Influences C Allocation and N Acquisition in Moist Tundra in Response to N Fertilization, P Fertilization, and Warming Erik Hobbie.
Evolution in action: The fitness effects of beneficial mutations in alternative environments Taylor M. Warren and Vaughn S. Cooper* University of New Hampshire,
Sensing Winter Soil Respiration Dynamics in Near-Real Time Alexandra Contosta 1, Elizabeth Burakowski 1,2, Ruth Varner 1, and Serita Frey 3 1 University.
Carbon Isotopes in Individual Compounds 03 February 2010.
THE MOLECULES OF LIFE: 4. Nucleic Acids 1. Carbohydrates 3. Lipids
Questions How do different methods of calculating LAI compare? Does varying Leaf mass per area (LMA) with height affect LAI estimates? LAI can be calculated.
Improve Production of Microbial Cellulose by Acetobacter xylinum with Addition of Microparticles in Synthetic and Complex Media under Shaking Culture Conditions.
Effects of mercury on ectomycorrhizal fungi Sharron Crane 1,2, John Dighton 1,3 and Tamar Barkay 1,2 1 Graduate Program in Ecology and Evolution, 2 Department.
PLANTS HAVE OTHER NUTRITIONAL REQUIREMENTS THE STORY BEYOND PHOTOSYNTHESIS.
Roots and arbuscular mycorrhizal fungi influence nitrogen cycling in agricultural soils under contrasting management Amanda B. Daly, A. Stuart Grandy Department.
Isotopic analysis of protein and structural material of sporocarps reveals fungal C and N sources Janet Chen 1, Linda T.A. van Diepen 1, Kirsten S. Hofmockel.
Enhancement of Phenol Biodegradation by South Magnetic Field Exposure Jongtai Jung (Professor/Ph. D) (Professor/Ph. D) Major of Environmental Engineering.
Chapter 29 Soil Bacteria and Mycorrhizal Fungi. Concept 29.3: Plants roots absorb essential elements from the soil Water, air, and soil minerals contribute.
CARBON ISOTOPES. Standards Vary 12 C 98.89‰ 13 C 1.11‰ 12 C 98.89‰ 13 C 1.11‰ 3 basic, fairly stable isotopes of Carbon, C 12, C 13, and C 14 C 14 is.
Media for Industrial Fermentation
Conclusions -The Arctic Ground is an important prey species in the Arctic and monitoring the species behavior and food source availability is accordingly.
Fig. 6. Carbon isotopes of different genera of saprotrophic fungi (±SE) in elevated CO 2 (y-axis) and ambient (x- axis) treatments. Values for the putative.
Rate and Duration of Seed Component Accumulation in Water Stressed Soybeans José L. Rotundo & Mark Westgate Iowa State University, 1301 Agronomy Hall,
Ectomycorrhizal fungi (ECM) form a mutualistic association with woody plant species and transfer water and nutrients to the host species in exchange for.
Microbial Biotechnology Commercial Production of Microorganism
IntroductionIntroduction Land-use change or intensification can influence the dynamics and storage of soil organic matter (SOM) and the extent of carbon.
Ectomycorrhiza Inside root Intercellular hyphae Does not enter cells Outside root Thick layer of hyphae around root Fungal sheath Lateral roots become.
Methods During summer 2011 we measured freshwater DOC uptake ( k ; day -1 ) using short-term, dark bottle bioassay incubations: where C 0 and C t represent.
Stable isotopic evidence for uptake of fish farming induced pollutants by filter-feeding mussels (Perna viridis) in a polyculture system Gao, Qin-Feng.
Soil Respiration Unit: Soil Science. Objectives O Define: soil respiration and soil microbes O Explain the role of soil respiration in determining soil.
Soil pH influences availability of soil nutrients.
The Effect of Four Early-Successional Pennsylvania Tree Species on Soil Bacterial Communities SMITH, G. and K. KLEINER, Dept. of Biological Sciences, York.
Approach: Samples were obtained from 4 different plots of land, each with a different land-use. The land uses that were examined were a grassland (hayed),
The preservation of long-range transported nitrate in snow at Summit, Greenland Jack Dibb 1, Meredith Hastings 2, Dorothy Fibiger 3*, D. Chen 4, L. Gregory.
ABSTRACT Species in natural communities are linked together by the transfer of energy and nutrients. We investigated the effects of top predators on nutrient.
Effects of simulated climate change on the abundance of an exotic weevil, Cyrtepistomus castaneus Bryan Marbert (ASU ) and Paul Hanson (ORNL) Contact Information:
Goal: to understand carbon dynamics in montane forest regions by developing new methods for estimating carbon exchange at local to regional scales. Activities:
Stable Isotopes in Peat Profiles Reveal Long-term Carbon and Nitrogen Dynamics at SPRUCE Erik A. Hobbie 1, Kirsten S. Hofmockel 2, Karis J. McFarlane 3,
Chapter 6 Microbial Nutrition and Growth. Microbial Growth Microorganisms are found in the harshest of environments – Deep ocean – Volcanic vents – Polar.
Abstract Man-made dams influence more than just the flow of water in a river. The build up of sediments and organic matter, increased residence times,
Earth, Ecological, & Environmental Sciences
Microbial O 2 Uptake During Sludge Biodegradation as Influenced by Material Physical Characteristics A. Mohajer 1, A. Tremier 2, S. Barrington 1, J. Martinez.
Above and Below ground decomposition of leaf litter Sukhpreet Sandhu.
Abstract The life cycle of holometabolous insects is distinctly divided into three life stages: the larval, pupal, and adult stages. During the larval.
Stoichiometry of homeostasis and growth across aquatic invertebrate detritivores Halvor M. Halvorson 1, Chris L. Fuller 2, Sally A. Entrekin 3, J. Thad.
Erik Swanson, Medhat Rehan, Louis Tisa
Samuel T. Dunn 1, 2, Andrew G. Bunn 3, John D. Schade 1
University of Pennsylvania
Nitrogen and Carbon Stable Isotope Composition Informs Metabolic Routing in Blarina brevicauda Tissues Altai Perry1, Ryan Stephens2, MS, and Erik Hobbie3,
GENERAL METHODS OF STUDYING
Fungal and Bacterial Dynamics in the Lettuce Rhizosphere Responding to Successive Additions of Cd and Zn. A. M. I. D. Amarakoon * and R. M. C. P. Rajapaksha.
Contact: Tel.: Exploring the influence of canopy structure on the link between canopy nitrogen concentration.
Carbon Cycling in Perennial Biofuel Management Systems
Δ13C in the saprotrophic fungus Amanita thiersii reveal increased C3 productivity of Midwestern lawns since 1982  Erik A. Hobbie1, Brian A. Schubert2,
Soil acidification affects carbon cycling more than nitrogen addition in European conifer and broadleaf forests Filip Oulehle, Karolina Tahovská, Tomáš.
Land Management, Mycorrhizal Diversity, and Soil Carbon Sequestration
Results and discussion
Daily question Use the second law of thermodynamics to explain why there is such a sharp decrease in usable energy as energy flows through a food chain.
Extra Tree Classifier-WS3 Bagging Classifier-WS3
Chapter 29 Part 2.
A Comparison of Forest Biodiversity Metrics Using Field Measurements and Aircraft Remote Sensing Kaitlyn Baillargeon Scott Ollinger,
Soil Bacteria and Mycorrhizal Fungi and Unusual Plants
Summary and Future Work
Nathan R. Thorp and Erik A. Hobbie
Evaluating the Ability to Derive Estimates of Biodiversity from Remote Sensing Kaitlyn Baillargeon Scott Ollinger, Andrew Ouimette,
Discussion/Conclusions
Presentation transcript:

Insights into carbon assimilation in ectomycorrhizal fungi through use of 13 C-labeled glucose and amino acids Megan Grass 1, Janet Chen 2, Andrew Ouimette 2, Erik Hobbie 2 1 Department of Biology, 2 Earth Systems Research Center, University of New Hampshire, Durham, New Hampshire, USA IntroductionResults The uptake of amino acids by ectomycorrhizal fungi is essential in expanding the range of nitrogen sources of their host plants to include organic forms. Many studies have examined the uptake of amino acids using specific 13 C-labeled amino acids such as glycine but the generality of these results is questionable because microbes assimilate a broad range of amino acids, which vary greatly in the extent of fungal retention of the amino acid carbon. The purpose of our study is to quantify the assimilation of carbon into two ectomycorrhizal fungi from isotopically labeled glucose and amino acids. Boletus has better capabilities to enzymatically degrade proteins and complex carbohydrates than Amanita 1, and also produces organic acids such as citrate. Based on the slope of the regression in Figure 5, Boletus appeared to have assimilated carbon from Phytagel that was solubilized by Boletus-produced citrate. Assimilation of organic nitrogen varied two-fold in Amanita and eight-fold in Boletus with shifts in supplied C:N. We saw little evidence of synthesis of amino acids from glucose in amino acid-supplied cultures, which would have lowered 13 C labeling in cultures compared to that expected from the hypothesized protein content of the hyphae. We did see indirect evidence for gluconeogenesis from amino acids, in that the labeling levels when supplied with 13 C- labeled amino acids were higher than could be accounted for by 13 C labeling of the protein alone based on the C:N of protein versus bulk fungi. Organic nitrogen probably preserves a carbon signature in fungal protein after uptake, and furthermore it appears likely that some carbon skeletons from supplied amino acids enter the Krebs cycle and are subsequently incorporated into non-protein compounds. We can now use information from this study to quantify organic nitrogen uptake from isotopic measurements into the field. Methods A Acknowledgements This work was supported by grants DEB and OPP from the US National Science Foundation and an REU supplement. Special thanks to Francesca Scandellari, Serita Frey, and Jesse Sadowsky. Amanita muscaria and a Boletus sp. (Figure 2 & 3) were cultured on potato dextrose media (Figure 4) and plugs were plated on a Phytagel® media at three C:N ratios of 10, 24, and 75 to simulate a potential range in nitrogen availability. Five treatment were used: 13 C-labeled glucose and ammonium, unlabeled glucose and ammonium, 13 C-labeled glucose and unlabeled amino acids, unlabeled glucose and 13 C- labeled amino acids, and unlabeled glucose and unlabeled amino acids. Figure 5: 13 C recovery in mycorrhizal biomass: Mycorrhizal biomass δ 13 C indicates that Boletus has used another carbon source such as the Phytagel the fungi were grown on. The fraction of amino acid-derived carbon assimilated into cultures varied with the supplied C/N of 10, 24, and 75. For these values, it was estimated for Amanita at 0.350, 0.275, and and for Boletus at 0,437, 0.246, and The δ 13 C was highest in the two 13 C-labeled glucose treatments and 13 C-labeled ammonium cultures were higher than amino acid cultures in δ 13 C. Boletus and δ 13 C Amanita δ 13 C correlated strongly across treatments (Figure 5), with Boletus about 56% of Amanita δ 13 C. Phytagel in Boletus plates liquefied. Treatment explained most of the variability for δ 13 C (Table 1 ). Presentation #:27 Discussion and Conclusions Contact information: 2 2 Figure 4: Fungi were grown on potato dextrose agar prior to plating onto the labeled experimental plates. Amino acids were from hydrolyzed cyanobacteria, and therefore included all microbial amino acids. We studied the relative flux of 13 C-labeled carbon from these two sources into fungal biomass. Phytagel dissolves with addition of citrate, making collection of hyphae easy. The bulk fungi from the labeled Phytagel plates were collected and dried. The bulk fungi were run on an isotope ratio mass spectrometer. Boletus Species. Amanita muscaria Species. Figure 1: Possible Carbon Uptake Pathways: Carbon can be assimilated into fungal tissues from either glucose via the Krebs cycle, direct uptake of organic nitrogen, or a combination of both (Figure 1). Effect Tests Source (DF) %VarProb > FSource (DF) %Var Prob > F Fungus (1) 0.32<0.0001Fungus*C/NTreat*Treat (8) 2.99 < C/NTreat (2) 0.75<0.0001ln C/N(1) Treatment (4) 87.94<0.0001Fungus*ln C/N(1) Fungus*C/NTreat (2) 2.32<0.0001Treatment*ln C/N(4) Fungus*Treat (4) C% (1) C/NTreat*Treat (8) 4.05 <0.0001Treat*C% (4) Table 1: Multiple regression analysis. The adjusted r 2 of the model is Lilleskov E, Hobbie E, Horton T Conservation of ectomycorrhizal fungi: exploring the linkages between functional and taxonomic responses to anthropogenic N deposition. Fungal Ecology 4: Figure 3: Figure 2: Citations