The Importance of Different Social Networks for Infectious Diseases Fredrik Liljeros Stockholm University Karolinska institutet Supported by the Swedish.

Slides:



Advertisements
Similar presentations
Six degrees: The science of a connected age By Duncan J. Watts Brian Lewis INF 385Q December 1, 2005 Brian Lewis INF 385Q December 1, 2005.
Advertisements

Classes will begin shortly. Networks, Complexity and Economic Development Class 5: Network Dynamics.
Sexual Networks in Contemporary Western Societies Fredrik Liljeros Karolinska institutet Stockholm University (Supported by the Swedish Institute for Public.
Routing in Poisson small-world networks A. J. Ganesh Microsoft Research, Cambridge Joint work with Moez Draief.
1 Small Worlds and Phase Transition in Agent Based Models with Binary Choices. Denis Phan ENST de Bretagne, Département Économie et Sciences Humaines &
Topology and Dynamics of Complex Networks FRES1010 Complex Adaptive Systems Eileen Kraemer Fall 2005.
Transport and Percolation in Complex Networks Guanliang Li Advisor: H. Eugene Stanley Collaborators: Shlomo Havlin, Lidia A. Braunstein, Sergey V. Buldyrev.
Complex Network Theory
Complex Networks Advanced Computer Networks: Part1.
Modeling of Complex Social Systems MATH 800 Fall 2011.
R 0 and other reproduction numbers for households models MRC Centre for Outbreak analysis and modelling, Department of Infectious Disease Epidemiology.
‘Small World’ Networks (An Introduction) Presenter : Vishal Asthana
CS8803-NS Network Science Fall 2013
Collective Dynamics of ‘Small World’ Networks C+ Elegans: Ilhan Savut, Spencer Telford, Melody Lim 29/10/13.
Algorithmic and Economic Aspects of Networks Nicole Immorlica.
Emergence of Scaling in Random Networks Albert-Laszlo Barabsi & Reka Albert.
Epidemics Modeling them with math. History of epidemics Plague in 1300’s killed in excess of 25 million people Plague in London in 1665 killed 75,000.
Modeling Malware Spreading Dynamics Michele Garetto (Politecnico di Torino – Italy) Weibo Gong (University of Massachusetts – Amherst – MA) Don Towsley.
It’s a Small World by Jamie Luo. Introduction Small World Networks and their place in Network Theory An application of a 1D small world network to model.
Population dynamics of infectious diseases Arjan Stegeman.
Small Worlds Presented by Geetha Akula For the Faculty of Department of Computer Science, CALSTATE LA. On 8 th June 07.
Presentation Topic : Modeling Human Vaccinating Behaviors On a Disease Diffusion Network PhD Student : Shang XIA Supervisor : Prof. Jiming LIU Department.
Scale Free Networks Robin Coope April Abert-László Barabási, Linked (Perseus, Cambridge, 2002). Réka Albert and AL Barabási,Statistical Mechanics.
1 Experiences from extracting large data sets from Swedish public offices Fredrik Liljeros.
Universal Behavior in a Generalized Model of Contagion Peter S. Dodds Duncan J. Watts Columbia University.
Infectious disease, heterogeneous populations and public healthcare: the role of simple models SIAM CSE 2009 K.A. Jane White Centre for Mathematical Biology.
Emerging Infectious Disease: A Computational Multi-agent Model.
Connectivity and the Small World Overview Background: de Pool and Kochen: Random & Biased networks Rapoport’s work on diffusion Travers and Milgram Argument.
Small-world networks. What is it? Everyone talks about the small world phenomenon, but truly what is it? There are three landmark papers: Stanley Milgram.
V5 Epidemics on networks
Code Red Worm Propagation Modeling and Analysis Cliff Changchun Zou, Weibo Gong, Don Towsley Univ. Massachusetts, Amherst.
CODE RED WORM PROPAGATION MODELING AND ANALYSIS Cliff Changchun Zou, Weibo Gong, Don Towsley.
A Data Intensive High Performance Simulation & Visualization Framework for Disease Surveillance Arif Ghafoor, David Ebert, Madiha Sahar Ross Maciejewski,
BASICS OF EPIDEMIC MODELLING Kari Auranen Department of Vaccines National Public Health Institute (KTL), Finland Division of Biometry, Dpt. of Mathematics.
Gennaro Cordasco - How Much Independent Should Individual Contacts be to Form a Small-World? - 19/12/2006 How Much Independent Should Individual Contacts.
Biological Attack Model (BAM) Formal Progress Report April 5, 2007 Sponsor: Dr. Yifan Liu Team Members: Richard Bornhorst Robert Grillo Deepak Janardhanan.
Showcase /06/2005 Towards Computational Epidemiology Using Stochastic Cellular Automata in Modeling Spread of Diseases Sangeeta Venkatachalam, Armin.
E PIDEMIC SPREADING Speaker: Ao Weng Chon Advisor: Kwang-Cheng Chen 1.
Modeling frameworks Today, compare:Deterministic Compartmental Models (DCM) Stochastic Pairwise Models (SPM) for (I, SI, SIR, SIS) Rest of the week: Focus.
Swedish Institute for Infectious Disease Control, Karolinska Institutet, Stockholm University Martin Camitz Macro versus micro in epidemic simulations.
Stefan Ma1, Marc Lipsitch2 1Epidemiology & Disease Control Division
1 Immunisation Strategies for a Community of Households Niels G Becker ( with help from David Philp ) National Centre for Epidemiology and Population Health.
Modeling for Science and Public Health, Part 2 NAGMS Council January 25, 2013 Stephen Eubank Virginia Bioinformatics Institute Virginia Tech.
Dynamic Random Graph Modelling and Applications in the UK 2001 Foot-and-Mouth Epidemic Christopher G. Small Joint work with Yasaman Hosseinkashi, Shoja.
Influenza epidemic spread simulation for Poland – A large scale, individual based model study.
Complex Network Theory – An Introduction Niloy Ganguly.
National Institutes of Health Emerging and Re-emerging Infectious Diseases Part 4.
Complex Network Theory – An Introduction Niloy Ganguly.
An Agent Epidemic Model Toward a general model. Objectives n An epidemic is any attribute that is passed from one person to others in society è disease,
Hazhir Rahmandad and John Sterman MIT-Albany Colloquium April 30, 2004
ESI workshop Stochastic Effects in Microbial Infection The National e-Science Centre Edinburgh September 28-29, 2010.
Class 21: Spreading Phenomena PartI
Simulating the Social Processes of Science Leiden| 9 April 2014 INGENIO [CSIC-UPV] Ciudad Politécnica de la Innovación | Edif 8E 4º Camino de Vera s/n.
Siddhartha Gunda Sorabh Hamirwasia.  Generating small world network model.  Optimal network property for decentralized search.  Variation in epidemic.
MA354 Math Modeling Introduction. Outline A. Three Course Objectives 1. Model literacy: understanding a typical model description 2. Model Analysis 3.
Class 4: It’s a Small World After All Network Science: Small World February 2012 Dr. Baruch Barzel.
Netlogo demo. Complexity and Networks Melanie Mitchell Portland State University and Santa Fe Institute.
Topics In Social Computing (67810) Module 1 Introduction & The Structure of Social Networks.
SIR Epidemics 박상훈.
Connectivity and the Small World
Hiroki Sayama NECSI Summer School 2008 Week 2: Complex Systems Modeling and Networks Network Models Hiroki Sayama
Sangeeta Venkatachalam, Armin R. Mikler
Public Policy and Managing Bioterrorism
Lecture 1: Complex Networks
EPIDEMIOLOGY AND NOSOCOMIAL INFECTIONS
Martin Camitz Swedish Institute for Infectious Disease Control,
Section 8.2: Shortest path and small world effect
Classes will begin shortly
Susceptible, Infected, Recovered: the SIR Model of an Epidemic
Presentation transcript:

The Importance of Different Social Networks for Infectious Diseases Fredrik Liljeros Stockholm University Karolinska institutet Supported by the Swedish Institute for Public Health and The Swedish Emergency Management Agency S-GEM

Stockholm Group for Epidemic Modelling, S-GEM Johan Giesecke SMI/KI Åkes Svensson SMI/SU Fredrik Liljeros SU/KI S-GEM

Why model epidemics? Will there be an outbreak? How many will be infected? The speed of the outbreak? How can we best limit the effects of an outbreak How many must be vaccinated? Who should be vaccinated? S-GEM

Outline Traditional Models Networks Empirical Network Studies S-GEM

Key Concepts Variation in number of contacts Assortative interaction Clustering/Transitivity Small World Network S-GEM

Epidemic models Deterministic models Stochastic models Agent-based models (Micro simulation models) S-GEM

A model should be as simple as possibly (But not to simple) S-GEM

Deterministic Models S-GEM

A very simplified example S-GEM Suceptible Infected

A simple differential equation- model S-GEM

Global saturation S-GEM

Our model is to simple capture global saturation S-GEM

We have to ad the number of susceptible into the model (K-I) S-GEM

It is possible to study important properties of deterministic models analytically S-GEM

The Basic reproduction rate, R 0 S-GEM

The SIS-model S-GEM

The SIS-model S-GEM

It is possible to let a deterministic model capture many relevant properties Individuals may become immune Individuals may die New individuals may be borned Individuals may belong to different groups with different type of behavior S-GEM

What are the implicit network assumptions in deterministic models S-GEM

Erdös-Rényi network (1960) Pál Erdös Pál Erdös ( ) S-GEM

Clustering/transitivity S-GEM

Clustering/transitivity S-GEM

Clustering/transitivity Suceptible Infectious S-GEM

Variation in number of contacts S-GEM

What do variation in number of contacts have on R 0 ? S-GEM

Assortative Interaction S-GEM

Struktural effects Variation in contacts Clustring assortativity Lower epidemic treshold Smaller outbreaks Slower outbreaks S-GEM

Why care about social networks? S-GEM

What do we know about structural properties of social networks? S-GEM

Collecting network data S-GEM

We can not use random samples S-GEM

Milgrams Study Nebraska Kansas Massachusetts Pamela Five persons S-GEM

But we know that social networks are clustred Should not the distance between randomly selected individuals be long? S-GEM

? The Small-world effect S-GEM

C(p) : clustering coeff. L(p) : average path length (Watts and Strogatz, Nature 393, 440 (1998)) Watts-Strogatz Model (from &

Ongoing Reserch and Verbal preliminary results S-GEM

Swedish Smallpox Model S-GEM

Take Home messages Variation in number of contacts Assortative interaction Clustering/Transitivity Small World Network S-GEM