1 Entropy Explained: The Origin of Some Simple Trends Lori A. Watson a, Odile Eisenstein b a Department of Chemistry, Indiana University, Bloomington,

Slides:



Advertisements
Similar presentations
Introduction to Computational Chemistry NSF Computational Nanotechnology and Molecular Engineering Pan-American Advanced Studies Institutes (PASI) Workshop.
Advertisements

The Heat Capacity of a Diatomic Gas
Chapter 14 Chemical Kinetics.
KINETICS.
CHAPTER 14 THE CLASSICAL STATISTICAL TREATMENT OF AN IDEAL GAS.
Software Demonstration and Course Description P.N. Lai.
Inorganic chemistry Assistance Lecturer Amjad Ahmed Jumaa  Calculating the work done in gas expansion.  Enthalpy and the first law of.
LINEAR MOLECULE ROTATIONAL TRANSITIONS:  J = 4  J = 3  J = 2  J = 1  J = 0.
Stable Isotope Geochemistry: Theory
Case Studies Class 5. Computational Chemistry Structure of molecules and their reactivities Two major areas –molecular mechanics –electronic structure.
Matter and Change Chemistry chapter 1.
Using Software to Bridge the Gap between Fundamental Science and Engineering Applications Jennifer Wilcox Department of Chemical Engineering Worcester.
MSEG 803 Equilibria in Material Systems 10: Heat Capacity of Materials Prof. Juejun (JJ) Hu
Lectures Molecular Bonding Theories 1) Lewis structures and octet rule
A Novel Computer Lab Experiment Studies of Diels-Alder Reactions Stanislaw Skonieczny and Mima Staikova Department of Chemistry, University of Toronto,
Lecture No. 1 Laws of Chemical Combinations Chemistry.
Big-picture perspective: The interactions of the d orbitals with their surrounding chemical environment (ligands) influences their energy levels, and this.
Computer Animations of Molecular Vibration Michael McGuan and Robert M. Hanson Summer Research 2004 Department of Chemistry St. Olaf College Northfield,
Bonding and Isomerism Nanoplasmonic Research Group Organic Chemistry Chapter 1.
Lecture 12 APPLICATIONS OF GROUP THEORY 1) Chirality
Pressure Volume Work Heats of reaction can be measured either at constant pressure, giving q P or ∆H values, or at constant volume, giving q V or ∆U values.
15.4 Rotational modes of diatomic molecules The moment of inertia, where μ is the reduced mass r 0 is the equilibrium value of the distance between the.
Primer to CanTherm 27 th Sept 2013 Shamel Merchant.
Statistical Methods For Engineers ChE 477 (UO Lab) Larry Baxter & Stan Harding Brigham Young University.
Ch 9 pages Lecture 18 – Quantization of energy.
Ch 23 pages Lecture 15 – Molecular interactions.
The Final Lecture (#40): Review Chapters 1-10, Wednesday April 23 rd Announcements Homework statistics Finish review of third exam Quiz (not necessarily.
Molecular Information Content
Computational Chemistry, WebMO, and Energy Calculations
Chapter 1: Scientists’ Tools. Introductory Activity Think about the following questions:  What does “doing science” mean to you?  Who “does science”?
Atomic Structure and Function 25 September 2003 Professor Taylor PhysicsChemistry Astronomy Astronomy Geology GeologyBiology Ecology Ecology.
ChE 452 Lecture 24 Reactions As Collisions 1. According To Collision Theory 2 (Equation 7.10)
Chapter 5 The Periodic Law
Electron Configuration and Periodicity
Physical Chemistry IV The Use of Statistical Thermodynamics
Chemical Kinetics Part 2
Calcium carbonate (marble) hydrochloric acid carbon dioxide.
Theoretical Study of Photodissociation dynamics of Hydroxylbenzoic Acid Yi-Lun Sun and Wei-Ping Hu* Department of Chemistry and Biochemistry, National.
Ideal diatomic gas: internal degrees of freedom
Lecture 9 Energy Levels Translations, rotations, harmonic oscillator
Diatomic and Polyatomic Gases
The Ideal Monatomic Gas. Canonical ensemble: N, V, T 2.
Prentice Hall © 2003Chapter 19 Chapter 19 Chemical Thermodynamics CHEMISTRY The Central Science 9th Edition.
Chemical Equations and Reactions. Describing Chemical Reactions  A process by which one or more substances are changed into one or more different substances.
Conformational Entropy Entropy is an essential component in ΔG and must be considered in order to model many chemical processes, including protein folding,
Chemical Reactions in Ideal Gases. Non-reacting ideal gas mixture Consider a binary mixture of molecules of types A and B. The canonical partition function.
Thermodynamics Is it hot in here or what?. Energy Many forms and sources Thermochemistry is interested in heat exchanges Breaking bonds takes energy.
KINETICS How Fast Does A Reaction Occur? Energy Diagrams l Reactants always start a reaction so they are on the left side of the diagram. Reactants l.
Ch 22 pp Lecture 2 – The Boltzmann distribution.
Sequential Oxidation of Group 6 Transition Metal Suboxide Clusters Caroline Chick Jarrold Department of Chemistry, Indiana University November 30, 2015.
The States Of Matter All matter is made of something, even if it looks like nothing. We make classifications according to its properties, both chemical.
Partition functions of ideal gases. We showed that if the # of available quantum states is >> N The condition is valid when Examples gases at low densities.
Unit 1 How do we distinguish substances?
CHE-20028: PHYSICAL & INORGANIC CHEMISTRY
Monatomic Crystals.
Entropy and Gibbs free energy. 2 Exothermic The products are lower in energy than the reactants Releases energy Often release heat.
Differentiate between physical and chemical changes and properties.[CHE.4A] October 2014Secondary Science - Chemistry.
Review Of Statistical Mechanics Continued
Is this your room? Then you already know about entropy.
The Ideal Diatomic and Polyatomic Gases. Canonical partition function for ideal diatomic gas Consider a system of N non-interacting identical molecules:
Atoms are the smallest units of chemical elements that enter into chemical reactions. ATOM.
Dept. of Chemistry University of Arizona A. Janczyk L. M. Ziurys The Millimeter/Submillimeter Spectrum of AlSH (X 1 A) : Further Investigation of the Metal.
Lecture 26 — Review for Exam II Chapters 5-7, Monday March 17th
Transition State Theory, Continued
LEARNING OBJECTIVES 8 TH Grade Blue Team Science.
Thermodynamics Think Energy Chemical Reactions Energy & Temperature Measuring Energy Kinetic Energy and Heat ©2011 University of Illinois Board of Trustees.
THERMODYNAMICS – ENTROPY AND FREE ENERGY 3A-1 (of 14) Thermodynamics studies the energy of a system, how much work a system could produce, and how to predict.
Reminder: Chemical Equilibrium
m1 VIBRATIONAL THEORY p.55 bonds ~ springs E = ½ kx2 m2 x is + or -
Chapter 5 - Phonons II: Quantum Mechanics of Lattice Vibrations
Presentation transcript:

1 Entropy Explained: The Origin of Some Simple Trends Lori A. Watson a, Odile Eisenstein b a Department of Chemistry, Indiana University, Bloomington, IN b LSDSMS, Université Montpellier 2, Montpellier, France

2 Why calculate entropy? Δn=n products – n reactants (n=number of molecules)  For Δn=0 (isomerization): ΔGº  ΔHº as ΔSº is nearly 0  For Δn  0: ΔSº starts being important For the reaction: CaCO 3 (s) CaO (s) + CO 2 (g) ΔSº=38.0 cal/K ΔHº = 42.6 kcal ΔGº=31.3 kcal at 25 ºC ΔGº= -5.8 kcal at 1000 ºC  Δn > 0 predicts ΔSº > 0, but it’s harder to know the magnitude of ΔSº  Many textbook examples exist where ΔSº opposes ΔHº and so ΔGº depends on the temperature.

3 Why use Density Functional Theory?  DFT is…  A relatively time-inexpensive computational method  Capable of calculating most elements in the periodic table  Used heavily by practicing chemists  Able to give highly accurate energies and structures of most molecules  Includes electron correlation—the fact that electrons in the molecule react to one another  Additionally…  Modern packages have easy to use graphical interfaces  Introduces the student to an important area of research— Computational Chemistry  “Breaks down” molecular properties (like entropy) into their components (like vibrational entropy)

4 How accurate is DFT in calculating entropies?  No significant dependence of error on molecular weight  No significant dependence of error on basis set

5 But be careful of molecular symmetry!  The symmetry number, σ, is different and incorrectly computed for molecules in different point groups, making the entropy incorrect by a factor of Rln(1/ σ).  There is confusion as to which frequency to remove when going from a non-linear molecule to a linear molecule.  Commercial programs will optimize the geometry of your molecule in the point group you submit it in (even if it’s not the “right” one!).  An incorrect point group, while giving you nearly identical geometric parameters, will result in very incorrect entropies.

6 Entropy in 1  2 p article systems (298 K)  Average TΔS for all reactions: 9.38 kcal/mol Range: kcal/mol

7 1  2 particle reactions that produce H 2 have TΔS = 8  1 kcal/mol at 298 K  Reactions that produce H 2 as one of the two particles have an average entropy change of 8.4 kcal/mol, largely determined by the translational entropy. For an ideal gas, the translational contribution of entropy for independent particles as a function of pressure can be written as: Graph of translational entropy contributions (at K) to a reaction system with daughter particles of mass x and y (amu) [slice at x=2] TΔS (kcal/mol)

8 Why is there more entropy in reactions without linear molecules?  When the mass of one of the daughter particles is not 2, the translational entropy will be slightly higher than the 8.31 kcal/mol observed with H 2.  The rotational entropy, near zero when H 2 was liberated, is now increasing.  Look at the shape of the molecules—none are linear.  Linear molecules with smaller moments of inertia have small rotational partition functions and small contributions to Sº compared with nonlinear molecules with larger, multiple moments of inertia and correspondingly larger contributions to Sº.  Average of TΔSº for:  2 linear molecules produced: 7.73 kcal/mol  1 linear molecules produced: 8.40 kcal/mol  0 linear molecules produced: kcal/mol

9 The role of vibrational and electronic entropy  Vibrational entropy only plays a significant role in the overall reaction entropy if the number of low frequency vibrations changes significantly from reactant to product.  The vibrations that play the largest role in the calculated S vib values must be low-energy (low frequency) vibrations, such as rotation of a CH 3 group.  All molecules have an S elec contribution of Rln(g) (where g is the degeneracy of the spin multiplicity (g=2S+1)—zero for a singlet!). So for molecules which are ground state triplets, there is an added S elec of 0.65 kcal/mol at K.  Usually, the change in vibrational entropy is near zero, reflecting the small change in rigidity of the reactant and product molecules. In some cases, larger S vib contributions are observed.  In other words, molecules lose their unique differences and become, nearly, billiard balls.

10 Application to 1  3 particle systems  Similar trends can be observed for 1  3 particle systems.  Largest contributor is the translational entropy—for 2 molecules of H 2, it is (8.31  2)=16.62 kcal/mol  Translational contribution increases with heavier products; rotational contribution increases with non-linear products.  Somewhat larger negative vibrational entropies are observed, consistent with loss of easy rotation around C-C single bonds.

11 Extension to heavier main group compounds  Hypothesis: Vibrational contributions of entropy should be more important because heavier analogues of 1 st row compounds have lower vibrational modes associated with them.  Conclusion: Vibrational contributions make no significant difference in the 8  1 kcal/mol TΔS observed for 1 st row compounds.  Rotational entropy is more important (especially for Si 2 H 6 ), as the molecules are not planar.

12 Entropy calculations for transition metal systems  Entropic contributions can make a large difference in the spontaneity of organometallic reactions.  For reactions that produce a linear molecule of low molecular weight, TΔS remains near 8 kcal/mol.  For non-linear molecule producing reactions, or when the product molecule has a particularly low energy vibration, a value of 10 kcal/mol is a good “back of the napkin” number.  Increase in vibrational entropy reflects the “softer” nature of metal–to-ligand bonds.

13 Why would you use this in your classroom?  “Doing science” means observing and then explaining trends in recorded measurements  Here, students must “observe” reaction entropies and “explain trends” based on their knowledge of molecular structure and vibrational frequencies.  A student project based on exploring entropy complements existing discussions of…  Thermodynamics (when is a reaction favored?)  Statistical mechanics (what molecular properties influence the observed value?)  Quantum mechanics (can an “approximate” wave function generate useful and relevant predictions of molecular properties?)

14 What will this teach my students?  Experimental design  What reactions will be calculated? Why?  Modern computational methods  What factors—method, basis set, input symmetry, etc.—will influence the result?  Writing about chemistry  What trends are expected? Observed? Why? A good example of Discovery Based Learning in the curriculum

15 What will I need to do this?  A computational package that can perform DFT calculations and some mathematical software for plotting.  For example: Gaussian 98 (has the option of a graphical user interface) and Maple  Access to at least one desktop PC or UNIX system (for organic molecules) or a larger computing system (for larger inorganic molecules)  One or two lecture periods to explain the basics of computational chemistry and DFT  A recitation or lab period to give a short demonstration of the software  This project could be carried out as a class (assigning different molecules to each student), as a lab team, or as an individual assignment/project.

16 Conclusions and Acknowledgements  Conclusions:  For 1  2 particle organic reactions that produce a linear molecule, TΔS is 8  1 kcal/mol.  Rotational entropy increases TΔS for non-linear products.  Molecular identity is less important.  Trends are mirrored for main group and transition metal species.  The use of modern computational methods to explore trends in chemical systems introduces students to discovery based learning and a new area of research.  Acknowledgements:  Kenneth G. Caulton, Ernest R. Davidson, and Odile Eisenstein  National Science Foundation and Indiana University Chemistry Department