Software & services for georeferencing of natural history collections data automated georeferencing verification & correction batch processing geographic.

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Presentation transcript:

Software & services for georeferencing of natural history collections data automated georeferencing verification & correction batch processing geographic visualization uncertainty determination collaborative georeferencing interoperability multi-lingual kml export google, bing, openstreet, wms soap & rest api training

What is Georeferencing? pushepatapa creek, trib. to pearl river, 7.8 miles north of bogalusa at hwy 21; Washington; LA; USA latitude: longitude: uncertainty radius: 48m uncertainty polygon: , , , , , …

Sample Workflow For Computer Assisted Georeferencing Data Preparation Automated Coordinate & Uncertainty Generation o Locality description parsing and analysis Verification & Adjustment of Results o Fine tuning the results on a visual map display o Validation services can assist

Maximizing productivity

Automated Georeferencing example within GEOLocate Desktop Application

Uncertainty Within GEOLocate Polygons represented as a comma delimited array of vertices using latitude and longitude Point radius and polygonal uncertainties Supports auto-detection and generation of polygons (web app only, in development for desktop app) Point radius represented as a distance in meters from georeferenced point

Collaborative Georeferencing Efficiency of Sharing Data –Similar records from various institutions can be matched and georeferenced simultaneously. –DiGIR /.CSV used for data input (other alternatives in development). Efficiency of Distributing Workloads –Requires significant management overhead.

Efficiency of Sharing Data

Collaborative Georeferencing DiGIR Service Record Processor CoGe Client Application (Desktop or Web) Cache Update Web Service CoGe Web Portal Application Data Store Georeferencing Web Service Data Retrieval Web Service Insert Correction Web Service Remote Data Source

Lepomis macrochirus Notropis chrosomus Notropis volucellus Micropterus coosae Lepomiscyanellus Lepomis cyanellus Cottus carolinae Hypentelium etowanum Etheostoma ramseyi Validation via Taxonomic Footprints Uses point occurrence data from distributed museum databases to validate georeferenced data Footprint for species list collected at Little Schultz Creek, off Co. Rd. 26 (Schultz Spring Road), approx. 5 mi N of Centreville; Bibb County; White circles indicate results from automated georeferencing. Black circle indicates actual collection locality based on GPS. Occurrence data from UAIC & TUMNH

Barbus paludinosus Mesobola brevianalis

Interoperable Services Georeferencing –Version 1 (similar to desktop capabilities) –Version 2 (used by web apps) Validation –Taxon Footprint Application –Embeddable web client

SOAP & HTTP Get/Post Georeferencing Services: GEOLocate v2

HTTP/ OK Content-Type: text/xml; charset=utf-8 Content-Length: length string int double double string int string double string. georef2() Version 2 Get Response

Combined, the 2 services handle an average of 10,400 georeferencing requests per day (based on Jan-Aug of 2011 data). FeatureVersion 1Version 2 Automated georeferencingYes Bridge crossingsYes Water body detectionYes Selection of best resultYes Scoring & sorting of resultsPartialYes Uncertainty radiusNoYes Uncertainty polygonNoYes Language optionNoYes Process metadataNoYes Biogeomancer pass-throughNoYes Alternative administrative unitsNoYes Comparison of Service Capabilities

Validation Service: Taxon Footprints HTTP SOAP & Get/Post: XML & KML output options Get with XML Output: us+furcatus&lat=30&lon=-89&format=raw Get with KML Ouptut: us+furcatus&lat=30&lon=-89&format=kml SOAP:

Web App as a WS Client

Application Service: Embeddable Client Lightweight web based client, specifically designed for embedding into other web applications. Requires JavaScript postMessage – compatible with all modern browsers.

Arctos