Introduction to OpenMP Introduction OpenMP basics OpenMP directives, clauses, and library routines.

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Presentation transcript:

Introduction to OpenMP Introduction OpenMP basics OpenMP directives, clauses, and library routines

Motivation Pthread is too tedious: explicit thread management is often unnecessary –Consider the matrix multiply example We have a sequential code, we know which loop can be executed in parallel; the program conversion is quite mechanic: we should just say that the loop is to be executed in parallel and let the compiler do the rest. OpenMP does exactly that!!!

What is OpenMP? What does OpenMP stands for? –Open specifications for Multi Processing via collaborative work between interested parties from the hardware and software industry, government and academia. OpenMP is an Application Program Interface (API) that may be used to explicitly direct multi- threaded, shared memory parallelism. API components: Compiler Directives, Runtime Library Routines. Environment Variables OpenMP is a directive-based method to invoke parallel computations on share-memory multiprocessors

What is OpenMP? OpenMP API is specified for C/C++ and Fortran. OpenMP is not intrusive to the original serial code: instructions appear in comment statements for fortran and pragmas for C/C++. OpenMP website: –Materials in this lecture are taken from various OpenMP tutorials in the website and other places.

Why OpenMP? OpenMP is portable: supported by HP, IBM, Intel, SGI, SUN, and others –It is the de facto standard for writing shared memory programs. –To become an ANSI standard? OpenMP can be implemented incrementally, one function or even one loop at a time. –A nice way to get a parallel program from a sequential program.

How to compile and run OpenMP programs? Gcc 4.2 and above supports OpenMP 3.0 –gcc –fopenmp a.c –Try example1.c To run: ‘a.out’ –To change the number of threads: setenv OMP_NUM_THREADS 4 (tcsh) or export OMP_NUM_THREADS=4(bash)

OpenMP execution model OpenMP uses the fork-join model of parallel execution. –All OpenMP programs begin with a single master thread. –The master thread executes sequentially until a parallel region is encountered, when it creates a team of parallel threads (FORK). –When the team threads complete the parallel region, they synchronize and terminate, leaving only the master thread that executes sequentially (JOIN).

OpenMP general code structure #include main () { int var1, var2, var3; Serial code... /* Beginning of parallel section. Fork a team of threads. Specify variable scoping*/ #pragma omp parallel private(var1, var2) shared(var3) { /* Parallel section executed by all threads */... /* All threads join master thread and disband*/ } Resume serial code... }

Data model Private and shared variables Variables in the global data space are accessed by all parallel threads (shared variables). Variables in a thread’s private space can only be accessed by the thread (private variables) several variations, depending on the initial values and whether the results are copied outside the region.

#pragma omp parallel for private( privIndx, privDbl ) for ( i = 0; i < arraySize; i++ ) { for ( privIndx = 0; privIndx < 16; privIndx++ ) { privDbl = ( (double) privIndx ) / 16; y[i] = sin( exp( cos( - exp( sin(x[i]) ) ) ) ) + cos( privDbl ); } Parallel for loop index is Private by default.

OpenMP directives Format: #progma omp directive-name [clause,..] newline (use ‘\’ for multiple lines) Example: #pragma omp parallel default(shared) private(beta,pi) Scope of a directive is one block of statements { …}

Parallel region construct A block of code that will be executed by multiple threads. #pragma omp parallel [clause …] { …… } (implied barrier) Clauses: if (expression), private (list), shared (list), default (shared | none), reduction (operator: list), firstprivate(list), lastprivate(list) –if (expression): only in parallel if expression evaluates to true –private(list): everything private and local (no relation with variables outside the block). –shared(list): data accessed by all threads –default (none|shared)

The reduction clause: Sum = 0.0; #pragma parallel default(none) shared (n, x) private (I) reduction(+ : sum) { For(I=0; I<n; I++) sum = sum + x(I); } –Updating sum must avoid racing condition –With the reduction clause, OpenMP generates code such that the race condition is avoided. Firstprivate(list): variables are initialized with the value before entering the block Lastprivate(list): variables are updated going out of the block.

Work-sharing constructs #pragma omp for [clause …] #pragma omp section [clause …] #pragma omp single [clause …] The work is distributed over the threads Must be enclosed in parallel region No implied barrier on entry, implied barrier on exit (unless specified otherwise)

The omp for directive: example

Schedule clause (decide how the iterations are executed in parallel): schedule (static | dynamic | guided [, chunk])

The omp session clause - example

Synchronization: barrier For(I=0; I<N; I++) a[I] = b[I] + c[I]; For(I=0; I<N; I++) d[I] = a[I] + b[I] Both loops are in parallel region With no synchronization in between. What is the problem? Fix: For(I=0; I<N; I++) a[I] = b[I] + c[I]; #pragma omp barrier For(I=0; I<N; I++) d[I] = a[I] + b[I]

Critical session For(I=0; I<N; I++) { …… sum += A[I]; …… } Cannot be parallelized if sum is shared. Fix: For(I=0; I<N; I++) { …… #pragma omp critical { sum += A[I]; } …… }

OpenMP environment variables OMP_NUM_THREADS OMP_SCHEDULE

OpenMP runtime environment omp_get_num_threads omp_get_thread_num omp_in_parallel Routines related to locks ……

OpenMP example See pi.c

Sequential Matrix Multiply For (I=0; I<n; I++) for (j=0; j<n; j++) c[I][j] = 0; for (k=0; k<n; k++) c[I][j] = c[I][j] + a[I][k] * b[k][j];

OpenMP Matrix Multiply #pragma omp parallel for private(j, k) For (I=0; I<n; I++) for (j=0; j<n; j++) c[I][j] = 0; for (k=0; k<n; k++) c[I][j] = c[I][j] + a[I][k] * b[k][j];

Travelling Salesman Problem(TSP) The map is represented as a graph with nodes representing cities and edges representing the distances between cities. A special node (cities) is the starting point of the tour. Travelling salesman problem is to find the circle (starting point) that covers all nodes with the smallest distance. This is a well known NP-complete problem.

Sequential TSP Init_q(); init_best(); While ((p = dequeue()) != NULL) { for each expansion by one city { q = addcity (p); if (complete(q)) {update_best(q);} else enqueue(q); }

OpenMP TSP Do_work() { While ((p = dequeue()) != NULL) { for each expansion by one city { q = addcity (p); if (complete(q)) {update_best(q);} else enqueue(q); } main() { init_q(); init_best(); #pragma omp parallel for for (i=0; I < NPROCS; i++) do_work(); }

Sequential SOR OpenMP version?

Summary: –OpenMP provides a compact, yet powerful programming model for shared memory programming It is very easy to use OpenMP to create parallel programs. –OpenMP preserves the sequential version of the program –Developing an OpenMP program: Start from a sequential program Identify the code segment that takes most of the time. Determine whether the important loops can be parallelized –The loops may have critical sections, reduction variables, etc Determine the shared and private variables. Add directives

OpenMP discussion Ease of use –OpenMP takes cares of the thread maintenance. Big improvement over pthread. –Synchronization Much higher constructs (critical section, barrier). Big improvement over pthread. OpenMP is easy to use!!

OpenMP discussion Expressiveness –Data parallelism: MM and SOR Fits nicely in the paradigm –Task parallelism: TSP Somewhat awkward. Use OpenMP constructs to create threads. OpenMP is not much different from pthread.

OpenMP discussion Exposing architecture features (performance): –Not much, similar to the pthread approach Assumption: dividing job into threads = improved performance. How valid is this assumption in reality? –Overheads, contentions, synchronizations, etc –This is one weak point for OpenMP: the performance of an OpenMP program is somewhat hard to understand.

OpenMP final thoughts Main issues with OpenMP: performance –Is there any obvious way to solve this? Exposing more architecture features? –Is the performance issue more related to the fundamantal way that we write parallel program? OpenMP programs begin with sequential programs. May need to find a new way to write efficient parallel programs in order to really solve the problem.