Photodissociation of protonated formic acid Jayshree Nagesh, Shivangi Nangia, Marissa Saunders, Diane Neff & Lori Burns Telluride School of Theoretical.

Slides:



Advertisements
Similar presentations
Chemistry 5.12 Spri ng 2003, Week 3 / Day 2 Handout #7: Lecture 11 Outline IX. Free Radical Reactions (Read Chapter 4) A. Chlorination of Methane (4-2)
Advertisements

Atmospheric chemistry
Understanding Complex Spectral Signatures of Embedded Excess Protons in Molecular Scaffolds Andrew F. DeBlase Advisor: Mark A. Johnson 68 th Internatinal.
Work Package 4: Photochemical Devices Midterm-Review Meeting Molecular Machines- Design and Nano-Scale Handling of Biological Antetypes and Artificial.
Molecular dynamics modeling of thermal and mechanical properties Alejandro Strachan School of Materials Engineering Purdue University
Lecture 6 nitrogen and ozone photochemistry Regions of Light Absorption of Solar Radiation.
Dynamics of Vibrational Excitation in the C 60 - Single Molecule Transistor Aniruddha Chakraborty Department of Inorganic and Physical Chemistry Indian.
Energy – The capacity for doing work The ability to change matter.
Ultraviolet Photodissociation Dynamics of the Cyclohexyl Radical Michael Lucas, Yanlin Liu, Jingsong Zhang Department of Chemistry University of California,
ChE 553 Lecture 25 Theory Of Activation Barriers 1.
Case Studies Class 5. Computational Chemistry Structure of molecules and their reactivities Two major areas –molecular mechanics –electronic structure.
Femtochemistry: A theoretical overview Mario Barbatti II – Transient spectra and excited states This lecture can be downloaded.
Chemistry in Extreme Environments Chris Bennett, Xibin Gu, Brant Jones, Pavlo Maksyutenko, Fangtong Zhang, Ralf I. Kaiser Department of Chemistry, University.
Femtochemistry: A theoretical overview Mario Barbatti III – Adiabatic approximation and non-adiabatic corrections This lecture.
MMP A Driver’s Guide to Photochemistry: Roads (ie. Surfaces), Crossings and Intersections (A Discussion of MMP ) Tracy Morkin November.
Oxidation-Reduction important reaction type in biochemistry Electron transfer reaction many different types of reactions Oxidation and reduction have to.
Single Molecule Dissociation by Tunneling Electrons.
METO 621 Lesson 20.
METO 637 LESSON 3. Photochemical Change A quantum of radiative energy is called a photon, and is given the symbol h Hence in a chemical equation we.
Energy - The ability to do work Needed by all living things There are different forms of energy Light Heat Electrical Sound.
Energy and Reactions. matter and energy matter: anything that has mass and takes up space energy: ability to do work or cause change energy is used anytime.
The torsional spectrum of disilane N. Moazzen-Ahmadi, University of Calgary V.-M. Horneman, University of Oulu, Finland.
TAUTOMERIZATION IN BIOMOLECULES as Investigated by Quantum Chemistry and Molecular Dynamics: Cytosine and Cytidine Géza Fogarasi, Institute of Chemistry,
22 September, 1997Chem 1A03E/1E03E THERMOCHEMISTRY (Ch. 6)1 Thermochemistry - Energy of Chemical Reactions Contents Contents: heat, work, forms of energy.
Evidence of Radiational Transitions in the Triplet Manifold of Large Molecules Haifeng Xu, Philip Johnson Stony Brook University Trevor Sears Brookhaven.
Matter & Energy Alex Sands. Atoms Basic building blocks of all matter Microscopic particles Makes up everything, all matter Chemical bonds hold atoms.
Theoretical Study of Photodissociation dynamics of Hydroxylbenzoic Acid Yi-Lun Sun and Wei-Ping Hu* Department of Chemistry and Biochemistry, National.
Vibrational Relaxation of CH 2 ClI in Cold Argon Amber Jain Sibert Group 1.
Ultraviolet Photodissociation Dynamics of the 3-Cyclohexenyl Radical Michael Lucas, Yanlin Liu, Jasmine Minor, Raquel Bryant, Jingsong Zhang Department.
Quantal and classical geometric phases in molecules: Born-Oppenheimer Schrodinger equation for the electronic wavefunction Florence J. Lin University of.
Peslherbe’s Laboratory Theoretical/Computational Chemistry - Research Interests Cluster Fragmentation and Catalysis Reaction occuring between Vanadium-oxides.
Molecular modeling of protein-ligand interactions: Detailed simulations of a biotin-streptavidin complex Prof. Terry P. Lybrand Vanderbilt University Center.
ChE 553 Lecture 20 Mechanisms On Metal Surfaces 1.
2 Outline Background Objective Quantum Chemical Analysis Combinatorial Study and Data Mining Conclusion.
Elucidation of Proton Assisted Fluxionality in Transition-Metal Oxide (TMO) Clusters Raghunath O. Ramabhadran Indiana University, Bloomington 1.
1 Dynamics of Chemical Reactions and Photochemical Processes Yuan T. Lee Academia Sinica, Taipei, Taiwan.
Elusive Carbonic Acid: A Determination of its Vapor Pressures and Enthalpy of Sublimation for Mars and Beyond Ariel S. Lewis 1,3, Paul D. Cooper 2,3, Marla.
ChE 553 Lecture 29 Catalysis By Metals 1. Objective Apply what we have learned to reactions on metal surfaces 2.
Insight into peptide folding role of solvent and hydrophobicity dynamics of conformational transitions.
Chemistry. Elements An element is a substance that ….
Lecture 10. Chemical Bonding. H 2 Molecule References Engel, Ch. 12 Ratner & Schatz, Ch. 10 Molecular Quantum Mechanics, Atkins & Friedman (4th ed. 2005),
Vicki Wysocki (University of Arizona) Probing Influence of Charge on Structures of Protein Complexes with Surface Induced Dissociation and Ion Mobility.
Thermodynamics / Free Energy & ATP
1 HOONO ISOMERIZATION TO HONO 2 INVOLVING CONICAL INTERSECTIONS T. J. DHILIP KUMAR, and JOHN R. BARKER Department of Atmospheric, Oceanic and Space Sciences,
A Quantum Chemical Study of HZnCH 3 A Transition Metal Compound with 4s 2 Recoupled Pair Bonding David E. Woon & Thom H. Dunning, Jr. RI12.
Role of Theory Model and understand catalytic processes at the electronic/atomistic level. This involves proposing atomic structures, suggesting reaction.
MD (here)MD*EXP (kcal/mole)  (D) D (cm/s) 298K ENHANCED H ION TRANSPORT AND HYDRONIUM ION FORMATION T. S. Mahadevan.
PCET Concepts: HAT vs. EPT and Nonadiabaticity
MECHANISTIC STUDIES OF SULFATE HYDROLYSIS Benjamin T. Burlingham, 1 Lisa M. Pratt, 2 Ernest R. Davidson, 3 Vernon J. Shiner, Jr., 4 Jon Fong, 2 Theodore.
6061 Geoscience Systems ( Atmospheric Radiation Energy Budget How the atmosphere system is driven? Lecture.
STRUCTURAL CHARACTERIZATION OF HYDROXYL RADICAL ADDUCTS IN AQUEOUS MEDIA Irek Janik, GNR Tripathi Notre Dame Radiation Laboratory.
Hybrid Quantum-Classical Molecular Dynamics of Enzyme Reactions Sharon Hammes-Schiffer Penn State University.
Infrared Resonance Enhanced Photodissociation of Au + (CO) n Complexes in the Gas Phase Joe Velasquez, III, E. Dinesh Pillai and Michael A. Duncan Department.
Atomic and Molecular Structure. 1. e. Students know the nucleus of the atom is much smaller than the atom yet contains most of its mass.
Main Title Manori Perera 1 and Ricardo Metz University of Massachusetts Amherst 64 th International Symposium on Molecular Spectroscopy June 25th, 2009.
Near-Infrared Photochemistry of Atmospheric Nitrites Paul Wennberg, Coleen Roehl, Geoff Blake, and Sergey Nizkorodov California Institute of Technology.
Chemistry 1011 Slot 51 Chemistry 1011 TOPIC Rate of Reaction TEXT REFERENCE Masterton and Hurley Chapter 11.
Patrick Z. El-Khoury, Alexander N. Tarnovsky, and Massimo Olivucci Structure of the Photochemical Reaction Pathway Populated via the Promotion of CF 2.
Key Terms Average kinetic energy - Energy associated with the movement of matter and mass Bond energy - The amount of energy it takes to break one mole.
CF14 EGI-XSEDE Workshop Session Tuesday, May 20 Helsinki, Findland Usecase 2 TTU-COMPCHEM Collaboration on Direct Classical and Semiclassical Dynamics.
Basic Chemistry for Biology Students Topic 3.0. Atoms.
Erin M. Duffy, Brett M. Marsh, Jonathan M. Voss, Etienne Garand University of Wisconsin, Madison International Symposium on Molecular Spectroscopy June.
ChE 551 Lecture 29 Catalysis By Metals.
Microbial Metabolism.
Atom-molecule inelastic collision dynamics in open shell
Electron Transfer in cluster Anions:
Blue Waters Research
Zheng Shi, Ping Peng, Daniel Strohecker, and Yi Liao*
Energy Vocabulary.
Chapter 2 Chemistry of Life
Presentation transcript:

Photodissociation of protonated formic acid Jayshree Nagesh, Shivangi Nangia, Marissa Saunders, Diane Neff & Lori Burns Telluride School of Theoretical Chemistry July 25, Lizard Head Group

Protonated Formic Acid is Model System for Ester Decomposition Ester Hydrolysis Atmospheric Pollutant Elucidate formation of organic and biological molecules Astrochemistry

Background 70 % 42 ±3 kcal/mol 30 % 18±4 kcal/mol Mackey, G.I. et al. JACS, 100:24 (1978)‏ What factors favor the formation of the less thermodynamically stable product??? Protonated formic acid

More Background Sekiguchi et al., J Am Soc Mass Spectrom 2004, 15,

Research Questions Is the photochemical dissociation of formic acid similar to the thermally driven dissociation? How important is the quantum nature of proton migration in the dissociation pathway? How can we characterize energy transfer through the molecule? – Beyond the Born-Oppenheimer approximation!

Photodissociation Pathways in Excited States Dissociation occurs along C–O bond coordinate Consider species trapped by jet cooling into HCO–OH 2 + form Photoexcitation (~230 nm) induces transition to A 1 A manifold Anticipated radiative lifetime ~40 ns Evolution among several excited states leads to dissociation along alternate pathways Sekiguchi et al., J Am Soc Mass Spectrom 2004, 15,

Quantum nature of proton Sekiguchi et al. used “on the fly” direct dynamics which uses classical equations of motion Proton transfer is better described by quantum dynamics Nuclear-electronic orbital (NEO) method (Hammes-Schiffer)‏ – Potential energy surface as a function of electron and proton Webb et al J Chem Phys , Sekiguchi et al., J Am Soc Mass Spectrom 2004, 15,

Energy Transfer Through the Molecule John Tully's TSTC presentation Exothermic protonation drives the endothermic dissociation in the thermally activated process Incorporating excited states allows for the investigation of multiple dissociation pathways – Surface Hopping

The Big Picture!! Formic acid serves as a model system for understanding acid catalyzed ester hydrolysis Photodissociation studies provide insight into microscopic mechanism of reactions

Acknowledgements Telluride School of Theoretical Studies Prof. Jack Simons Prof. John Tully Prof. Rigoberto Hernandez Prof. Geoff Hutchinson Nana Naisbitt & TSRC Staff