G. Cowan Lectures on Statistical Data Analysis 1 Statistical Data Analysis: Lecture 6 1Probability, Bayes’ theorem, random variables, pdfs 2Functions of.

Slides:



Advertisements
Similar presentations
Topics in statistical data analysis for particle physics
Advertisements

Slides from: Doug Gray, David Poole
CSCI 347 / CS 4206: Data Mining Module 07: Implementations Topic 03: Linear Models.
Machine Learning Neural Networks
Lecture 14 – Neural Networks
8. Statistical tests 8.1 Hypotheses K. Desch – Statistical methods of data analysis SS10 Frequent problem: Decision making based on statistical information.
G. Cowan Lectures on Statistical Data Analysis 1 Statistical Data Analysis: Lecture 10 1Probability, Bayes’ theorem, random variables, pdfs 2Functions.
G. Cowan Lectures on Statistical Data Analysis Lecture 2 page 1 Statistical Data Analysis: Lecture 2 1Probability, Bayes’ theorem 2Random variables and.
Neural Networks Marco Loog.
Optimization of Signal Significance by Bagging Decision Trees Ilya Narsky, Caltech presented by Harrison Prosper.
G. Cowan 2007 CERN Summer Student Lectures on Statistics1 Introduction to Statistics − Day 3 Lecture 1 Probability Random variables, probability densities,
Machine Learning CMPT 726 Simon Fraser University
Back-Propagation Algorithm
G. Cowan Lectures on Statistical Data Analysis 1 Statistical Data Analysis: Lecture 8 1Probability, Bayes’ theorem, random variables, pdfs 2Functions of.
G. Cowan 2011 CERN Summer Student Lectures on Statistics / Lecture 41 Introduction to Statistics − Day 4 Lecture 1 Probability Random variables, probability.
G. Cowan RHUL Physics Statistical Methods for Particle Physics / 2007 CERN-FNAL HCP School page 1 Statistical Methods for Particle Physics CERN-FNAL Hadron.
G. Cowan Lectures on Statistical Data Analysis Lecture 10 page 1 Statistical Data Analysis: Lecture 10 1Probability, Bayes’ theorem 2Random variables and.
G. Cowan Lectures on Statistical Data Analysis 1 Statistical Data Analysis: Lecture 7 1Probability, Bayes’ theorem, random variables, pdfs 2Functions of.
G. Cowan SUSSP65, St Andrews, August 2009 / Statistical Methods 3 page 1 Statistical Methods in Particle Physics Lecture 3: Multivariate Methods.
Artificial Neural Networks
G. Cowan Lectures on Statistical Data Analysis Lecture 7 page 1 Statistical Data Analysis: Lecture 7 1Probability, Bayes’ theorem 2Random variables and.
Midterm Review Rao Vemuri 16 Oct Posing a Machine Learning Problem Experience Table – Each row is an instance – Each column is an attribute/feature.
Machine Learning1 Machine Learning: Summary Greg Grudic CSCI-4830.
G. Cowan Statistical Methods in Particle Physics1 Statistical Methods in Particle Physics Day 3: Multivariate Methods (II) 清华大学高能物理研究中心 2010 年 4 月 12—16.
Comparison of Bayesian Neural Networks with TMVA classifiers Richa Sharma, Vipin Bhatnagar Panjab University, Chandigarh India-CMS March, 2009 Meeting,
Data Mining Practical Machine Learning Tools and Techniques Chapter 4: Algorithms: The Basic Methods Section 4.6: Linear Models Rodney Nielsen Many of.
G. Cowan Lectures on Statistical Data Analysis Lecture 1 page 1 Lectures on Statistical Data Analysis London Postgraduate Lectures on Particle Physics;
B-tagging Performance based on Boosted Decision Trees Hai-Jun Yang University of Michigan (with X. Li and B. Zhou) ATLAS B-tagging Meeting February 9,
MiniBooNE Event Reconstruction and Particle Identification Hai-Jun Yang University of Michigan, Ann Arbor (for the MiniBooNE Collaboration) DNP06, Nashville,
G. Cowan CLASHEP 2011 / Topics in Statistical Data Analysis / Lecture 21 Topics in Statistical Data Analysis for HEP Lecture 2: Statistical Tests CERN.
Computational Intelligence: Methods and Applications Lecture 23 Logistic discrimination and support vectors Włodzisław Duch Dept. of Informatics, UMK Google:
Non-Bayes classifiers. Linear discriminants, neural networks.
1 Glen Cowan Multivariate Statistical Methods in Particle Physics Machine Learning and Multivariate Statistical Methods in Particle Physics Glen Cowan.
G. Cowan Lectures on Statistical Data Analysis Lecture 2 page 1 Lecture 2 1 Probability Definition, Bayes’ theorem, probability densities and their properties,
G. Cowan 2011 CERN Summer Student Lectures on Statistics / Lecture 31 Introduction to Statistics − Day 3 Lecture 1 Probability Random variables, probability.
G. Cowan iSTEP 2015, Jinan / Statistics for Particle Physics / Lecture 21 Statistical Methods for Particle Physics Lecture 2: multivariate methods iSTEP.
Classification (slides adapted from Rob Schapire) Eran Segal Weizmann Institute.
Back-Propagation Algorithm AN INTRODUCTION TO LEARNING INTERNAL REPRESENTATIONS BY ERROR PROPAGATION Presented by: Kunal Parmar UHID:
Neural Networks - lecture 51 Multi-layer neural networks  Motivation  Choosing the architecture  Functioning. FORWARD algorithm  Neural networks as.
Chapter 20 Classification and Estimation Classification – Feature selection Good feature have four characteristics: –Discrimination. Features.
פרקים נבחרים בפיסיקת החלקיקים אבנר סופר אביב
1 Introduction to Statistics − Day 4 Glen Cowan Lecture 1 Probability Random variables, probability densities, etc. Lecture 2 Brief catalogue of probability.
G. Cowan Lectures on Statistical Data Analysis Lecture 8 page 1 Statistical Data Analysis: Lecture 8 1Probability, Bayes’ theorem 2Random variables and.
1 Introduction to Statistics − Day 3 Glen Cowan Lecture 1 Probability Random variables, probability densities, etc. Brief catalogue of probability densities.
Machine Learning 5. Parametric Methods.
G. Cowan IDPASC School of Flavour Physics, Valencia, 2-7 May 2013 / Statistical Analysis Tools 1 Statistical Analysis Tools for Particle Physics IDPASC.
Analysis of H  WW  l l Based on Boosted Decision Trees Hai-Jun Yang University of Michigan (with T.S. Dai, X.F. Li, B. Zhou) ATLAS Higgs Meeting September.
1 Introduction to Statistics − Day 2 Glen Cowan Lecture 1 Probability Random variables, probability densities, etc. Brief catalogue of probability densities.
G. Cowan Lectures on Statistical Data Analysis Lecture 9 page 1 Statistical Data Analysis: Lecture 9 1Probability, Bayes’ theorem 2Random variables and.
G. Cowan Lectures on Statistical Data Analysis Lecture 6 page 1 Statistical Data Analysis: Lecture 6 1Probability, Bayes’ theorem 2Random variables and.
G. Cowan Lectures on Statistical Data Analysis Lecture 5 page 1 Statistical Data Analysis: Lecture 5 1Probability, Bayes’ theorem 2Random variables and.
Giansalvo EXIN Cirrincione unit #4 Single-layer networks They directly compute linear discriminant functions using the TS without need of determining.
G. Cowan Lectures on Statistical Data Analysis Lecture 10 page 1 Statistical Data Analysis: Lecture 10 1Probability, Bayes’ theorem 2Random variables and.
G. Cowan Aachen 2014 / Statistics for Particle Physics, Lecture 21 Statistical Methods for Particle Physics Lecture 2: statistical tests, multivariate.
129 Feed-Forward Artificial Neural Networks AMIA 2003, Machine Learning Tutorial Constantin F. Aliferis & Ioannis Tsamardinos Discovery Systems Laboratory.
Data Mining: Concepts and Techniques1 Prediction Prediction vs. classification Classification predicts categorical class label Prediction predicts continuous-valued.
Combining Models Foundations of Algorithms and Machine Learning (CS60020), IIT KGP, 2017: Indrajit Bhattacharya.
Machine Learning Supervised Learning Classification and Regression
Comment on Event Quality Variables for Multivariate Analyses
Recent progress in multivariate methods for particle physics
Lectures on Statistics TRISEP School 27, 28 June 2016 Glen Cowan
Computing and Statistical Data Analysis Stat 5: Multivariate Methods
Computing and Statistical Data Analysis / Stat 6
TRISEP 2016 / Statistics Lecture 2
Statistical Analysis Tools for Particle Physics
SUSSP65, St Andrews, August 2009 / Statistical Methods 3
Parametric Methods Berlin Chen, 2005 References:
Machine Learning and Multivariate Statistical Methods in Particle Physics Glen Cowan RHUL Physics RHUL Computer Science Seminar.
Measurement of the Single Top Production Cross Section at CDF
Presentation transcript:

G. Cowan Lectures on Statistical Data Analysis 1 Statistical Data Analysis: Lecture 6 1Probability, Bayes’ theorem, random variables, pdfs 2Functions of r.v.s, expectation values, error propagation 3Catalogue of pdfs 4The Monte Carlo method 5Statistical tests: general concepts 6Test statistics, multivariate methods 7Goodness-of-fit tests 8Parameter estimation, maximum likelihood 9More maximum likelihood 10Method of least squares 11Interval estimation, setting limits 12Nuisance parameters, systematic uncertainties 13Examples of Bayesian approach 14tba

G. Cowan Lectures on Statistical Data Analysis 2

G. Cowan Lectures on Statistical Data Analysis 3

G. Cowan Lectures on Statistical Data Analysis 4 Nonlinear test statistics The optimal decision boundary may not be a hyperplane, → nonlinear test statistic accept H0H0 H1H1 Multivariate statistical methods are a Big Industry: Particle Physics can benefit from progress in Machine Learning. Neural Networks, Support Vector Machines, Kernel density methods,...

G. Cowan Lectures on Statistical Data Analysis 5 Introduction to neural networks Used in neurobiology, pattern recognition, financial forecasting,... Here, neural nets are just a type of test statistic. Suppose we take t(x) to have the form logistic sigmoid This is called the single-layer perceptron. s(·) is monotonic → equivalent to linear t(x)

G. Cowan Lectures on Statistical Data Analysis 6 The multi-layer perceptron Generalize from one layer to the multilayer perceptron: The values of the nodes in the intermediate (hidden) layer are and the network output is given by weights (connection strengths)

G. Cowan Lectures on Statistical Data Analysis 7 Neural network discussion Easy to generalize to arbitrary number of layers. Feed-forward net: values of a node depend only on earlier layers, usually only on previous layer (“network architecture”). More nodes → neural net gets closer to optimal t(x), but more parameters need to be determined. Parameters usually determined by minimizing an error function, where t (0), t (1) are target values, e.g., 0 and 1 for logistic sigmoid. Expectation values replaced by averages of training data (e.g. MC). In general training can be difficult; standard software available.

G. Cowan Lectures on Statistical Data Analysis 8 Neural network example from LEP II Signal: e  e  → W  W  (often 4 well separated hadron jets) Background: e  e  → qqgg (4 less well separated hadron jets) ← input variables based on jet structure, event shape,... none by itself gives much separation. Neural network output does better... (Garrido, Juste and Martinez, ALEPH )

G. Cowan Lectures on Statistical Data Analysis 9 Some issues with neural networks In the example with WW events, goal was to select these events so as to study properties of the W boson. Needed to avoid using input variables correlated to the properties we eventually wanted to study (not trivial). In principle a single hidden layer with an sufficiently large number of nodes can approximate arbitrarily well the optimal test variable (likelihood ratio). Usually start with relatively small number of nodes and increase until misclassification rate on validation data sample ceases to decrease. Usually MC training data is cheap -- problems with getting stuck in local minima, overtraining, etc., less important than concerns of systematic differences between the training data and Nature, and concerns about the ease of interpretation of the output.

G. Cowan Lectures on Statistical Data Analysis 10 Probability Density Estimation (PDE) techniques See e.g. K. Cranmer, Kernel Estimation in High Energy Physics, CPC 136 (2001) 198; hep-ex/ ; T. Carli and B. Koblitz, A multi-variate discrimination technique based on range-searching, NIM A 501 (2003) 576; hep-ex/ Construct non-parametric estimators of the pdfs and use these to construct the likelihood ratio (n-dimensional histogram is a brute force example of this.) More clever estimation techniques can get this to work for (somewhat) higher dimension.

G. Cowan Lectures on Statistical Data Analysis 11 Kernel-based PDE (KDE, Parzen window) Consider d dimensions, N training events, x 1,..., x N, estimate f (x) with Use e.g. Gaussian kernel: kernel bandwidth (smoothing parameter) Need to sum N terms to evaluate function (slow); faster algorithms only count events in vicinity of x (k-nearest neighbor, range search).

G. Cowan Lectures on Statistical Data Analysis 12

G. Cowan Lectures on Statistical Data Analysis 13

G. Cowan Lectures on Statistical Data Analysis 14

G. Cowan Lectures on Statistical Data Analysis 15

G. Cowan Lectures on Statistical Data Analysis 16 Decision trees Out of all the input variables, find the one for which with a single cut gives best improvement in signal purity: Example by MiniBooNE experiment, B. Roe et al., NIM 543 (2005) 577 where w i. is the weight of the ith event. Resulting nodes classified as either signal/background. Iterate until stop criterion reached based on e.g. purity or minimum number of events in a node. The set of cuts defines the decision boundary.

G. Cowan Lectures on Statistical Data Analysis 17 Finding the best single cut The level of separation within a node can, e.g., be quantified by the Gini coefficient, calculated from the (s or b) purity as: For a cut that splits a set of events a into subsets b and c, one can quantify the improvement in separation by the change in weighted Gini coefficients: where, e.g., Choose e.g. the cut to the maximize  ; a variant of this scheme can use instead of Gini e.g. the misclassification rate:

G. Cowan Lectures on Statistical Data Analysis 18

G. Cowan Lectures on Statistical Data Analysis 19

G. Cowan Lectures on Statistical Data Analysis 20

G. Cowan Lectures on Statistical Data Analysis 21

G. Cowan 22 Overtraining training sample independent test sample If decision boundary is too flexible it will conform too closely to the training points → overtraining. Monitor by applying classifier to independent test sample. Lectures on Statistical Data Analysis

G. Cowan Lectures on Statistical Data Analysis 23 Monitoring overtraining From MiniBooNE example: Performance stable after a few hundred trees.

G. Cowan Lectures on Statistical Data Analysis 24

G. Cowan Lectures on Statistical Data Analysis 25 Comparing multivariate methods (TMVA) Choose the best one!

G. Cowan Lectures on Statistical Data Analysis 26

G. Cowan Lectures on Statistical Data Analysis 27

G. Cowan Lectures on Statistical Data Analysis 28 Wrapping up lecture 6 We looked at statistical tests and related issues: discriminate between event types (hypotheses), determine selection efficiency, sample purity, etc. Some modern (and less modern) methods were mentioned: Fisher discriminants, neural networks, PDE, KDE, decision trees,... Next we will talk about significance (goodness-of-fit) tests: p-value expresses level of agreement between data and hypothesis

G. Cowan Lectures on Statistical Data Analysis 29 Extra slides

G. Cowan Lectures on Statistical Data Analysis 30 Particle i.d. in MiniBooNE Detector is a 12-m diameter tank of mineral oil exposed to a beam of neutrinos and viewed by 1520 photomultiplier tubes: H.J. Yang, MiniBooNE PID, DNP06 Search for  to e oscillations required particle i.d. using information from the PMTs.

G. Cowan Lectures on Statistical Data Analysis 31 BDT example from MiniBooNE ~200 input variables for each event ( interaction producing e,  or  Each individual tree is relatively weak, with a misclassification error rate ~ 0.4 – 0.45 B. Roe et al., NIM 543 (2005) 577

G. Cowan Lectures on Statistical Data Analysis 32 Comparison of boosting algorithms A number of boosting algorithms on the market; differ in the update rule for the weights.

G. Cowan 33 Using classifier output for discovery y f(y)f(y) y N(y)N(y) Normalized to unity Normalized to expected number of events excess? signal background search region Discovery = number of events found in search region incompatible with background-only hypothesis. p-value of background-only hypothesis can depend crucially distribution f(y|b) in the "search region". y cut Lectures on Statistical Data Analysis

G. Cowan Lectures on Statistical Data Analysis 34 Single top quark production (CDF/D0) Top quark discovered in pairs, but SM predicts single top production. Use many inputs based on jet properties, particle i.d.,... signal (blue + green) Pair-produced tops are now a background process.

G. Cowan Lectures on Statistical Data Analysis 35 Different classifiers for single top Also Naive Bayes and various approximations to likelihood ratio,.... Final combined result is statistically significant (>5  level) but not easy to understand classifier outputs.