Shulman and Rothman PNAS, 1998 In this period of intense research in the neurosciences, nothing is more promising than functional magnetic resonance imaging.

Slides:



Advertisements
Similar presentations
Class Business Class website is up Blackboard forum is up.
Advertisements

Basis of the BOLD Signal
Physiological Basis of the BOLD Signal Kerstin Preuschoff Institute for Empirical Research in Economics, University of Zurich Thanks for Slides and images.
Richard Wise FMRI Director +44(0)
The physiology of the BOLD signal
The BOLD Response Douglas C. Noll Department of Biomedical Engineering
Declaration of Conflict of Interest or Relationship
Chapter 4: Local integration 2: Neural correlates of the BOLD signal
Brain Imaging Techniques. Figure 2.1 A wrongheaded theory Myers: Psychology, Eighth Edition Copyright © 2007 by Worth Publishers Phrenology.
Principles of MRI. Some terms: –Nuclear Magnetic Resonance (NMR) quantum property of protons energy absorbed when precession frequency matches radio frequency.
Principles of NMR Protons are like little magnets
fMRI introduction Michael Firbank
Opportunity to Participate
Experimental Design in fMRI
Opportunity to Participate
Opportunity to Participate EEG study of auditory attention – takes about 2 hours Sign up on sheet or
FMRI - What Is It? Then: Example of fMRI in Face Processing Psychology 355: Cognitive Psychology Instructor: John Miyamoto 04/06 /2015: Lecture 02-1 This.
FMRI: Biological Basis and Experiment Design Lecture 13: BOLD Neurons per voxel Neural signaling Neural/vascular link? HRF –linearity 1 light year = 5,913,000,000,000.
FMRI: Biological Basis and Experiment Design Lecture 14: Localization I Spin echo BOLD Experiment design 1 light year = 5,913,000,000,000 miles?
FMRI: Biological Basis and Experiment Design Intro History Basic mechanism Neurohemodynamic coupling.
FMRI: Biological Basis and Experiment Design Lecture 3 Cell metabolism Vascular architecture Blood flow regulation Harrison, Harel et al., Cerebral Cortex.
BOLD fMRI Cheryl Olman 4th year student Department of Neuroscience and
Principles of MRI Some terms: – Nuclear Magnetic Resonance (NMR) quantum property of protons energy absorbed when precession frequency.
FMRI: Biological Basis and Experiment Design Lecture 4 History Basic mechanism Outstanding questions.
Measuring Blood Oxygenation in the Brain. Functional Imaging Functional Imaging must provide a spatial depiction of some process that is at least indirectly.
Methods of Studying the Brain Mrs. Joseph AP Psychology Solon High School.
IMAGING THE MIND Direct methods –Electrical activity (EEG, MEG) –Metabolic activity (EROS) Indirect methods –Changes in regional Cerebral Blood Flow (rCBF)
Mapping the Brain Pages Daily Learning Objectives: THE STUDENT WILL Describe why we call them Brain waves Explain scanning techniques, such as.
BOLD Contrast: Functional Imaging with MRI
Brain energy use, control of blood flow, and the basis of BOLD signals David Attwell University College London.
Human Cognitive Processes: psyc 345 Ch. 2: Cognitive Neuroscience Takashi Yamauchi © Takashi Yamauchi (Dept. of Psychology, Texas A&M University)
Neural mechanisms of Spatial Learning. Spatial Learning Materials covered in previous lectures Historical development –Tolman and cognitive maps the classic.
BOLD fMRI.
Attention Modulates Responses in the Human Lateral Geniculate Nucleus Nature Neuroscience, 2002, 5(11): Presented by Juan Mo.
Biology presentation Lu Wei Chen xinlu Hu zhenzhen He shanliang Minh Tue.
Fundamentals of Sensation and Perception THE WORLD, MIND AND BRAIN ERIK CHEVRIER SEPTEMBER 14 TH, 2015.
How well do we understand the neural origins of the fMRI BOLD signal? Owen J Arthurs and Simon Boniface Trends in Neuroscience, 2002 Gillian Elizabeth.
Physiological Basis of fMRI (and Neuroanatomy, in brief)
Neural Imaging II: Imaging Brain Function ANA 516: February 13, 2007 Jane E. Joseph, PhD.
BOLD Imaging An Introduction to MRI Physics and Analysis Michael Jay Schillaci, PhD Monday, February 25, 2008.
Neuronal Activity & Hemodynamics John VanMeter, Ph.D. Center for Functional and Molecular Imaging Georgetown University Medical Center.
STRATEGIES OF COGNITIVE NEUROSCIENCE The Coin of the Realm: correlations between psychological and neurophysiological events/structures Establishing two-way.
Cognition, Brain and Consciousness: An Introduction to Cognitive Neuroscience Edited by Bernard J. Baars and Nicole M. Gage 2007 Academic Press Chapter.
Statistical Parametric Mapping
© Kip Smith, 2003 Psychology 110B Introduction to Neurons The stuff of the brain and mind.
Class 3: Neurons  BOLD 2012 spring fMRI: theory & practice.
BOLD-Based fMRI or “The Stuff We Do With The 4T” Part I Chris Thomas April 27, 2001.
Functional MRI David Card. fMRI So what exactly are we measuring in fMRI? Our goal is to “see” neural activity We are actually seeing changes in blood.
Origin of Negative BOLD fMRI Signals
Alternative Neuroimaging Techniques PET TMS SPECT EEG
Functional MRI: Physiology and Methodology
What are we measuring in fMRI?
Statistical Parametric Mapping Lecture 2 - Chapter 8 Quantitative Measurements Using fMRI BOLD, CBF, CMRO 2 Textbook: Functional MRI an introduction to.
FMRI Methods Lecture8 – Electrophysiology & fMRI.
1 Psychology 304: Brain and Behaviour Lecture 2. 2 Research Methods 1.What techniques do biological psychologists use to assess the structure and function.
Electrophysiology & fMRI. Neurons Neural computation Neural selectivity Hierarchy of neural processing.
University of Jordan1 Physiology of Synapses in the CNS- L4 Faisal I. Mohammed, MD, PhD.
BOLD fMRI BIAC Graduate fMRI Course October 1, 2003.
Chapter 2 Cognitive Neuroscience. Some Questions to Consider What is cognitive neuroscience, and why is it necessary? How is information transmitted from.
Biophysics of BOLD and common image artefacts Rhodri Cusack Overview Biophysics of BOLD signal -Neural > Hemodynamic > MRI Complications at each level.
BOLD functional MRI Magnetic properties of oxyhemoglobin and deoxyhemoglobin L. Pauling and C. Coryell, PNAS USA 22: (1936) BOLD effects in vivo.
Physiological correlates of the BOLD signal an Introduction.
BOLD Contrast: Functional Imaging with MRI
Psych 204b: Computational Neuroimaging: Data Analysis
Angiogram—X-ray of head with dye present in cerebral blood vessels
BIAC Graduate fMRI Course October 5, 2005
fMRI: What Does It Measure?
What do we (not) measure with fMRI?
Biomedical Imaging: Magnetic Resonance Imaging - Basics
Cell to cell communication in the nervous system
Presentation transcript:

Shulman and Rothman PNAS, 1998 In this period of intense research in the neurosciences, nothing is more promising than functional magnetic resonance imaging (fMRI) and positron emission tomography (PET) methods, which localize brain activities. These functional imaging methodologies map neurophysiological responses to cognitive, emotional, or sensory stimulations. The rapid experimental progress made by using these methods has encouraged widespread optimism about our ability to understand the activities of the mind on a biological basis. However, the relationship between the signal and neurobiological processes related to function is poorly understood, because the functional imaging signal is not a direct measure of neuronal processes related to information transfer, such as action potentials and neurotransmitter release. Rather, the intensity of the imaging signal is related to neurophysiological parameters of energy consumption and blood flow. To relate the imaging signal to specific neuronal processes, two relationships must be established… The first relationship is between the intensity of the imaging signal and the rate of neurophysiological energy processes, such as the cerebral metabolic rates of glucose (CMRglc) and of oxygen (CMRO2). The second and previously unavailable relationship is between the neurophysiological processes and the activity of neuronal processes. It is necessary to understand these relationships to directly relate functional imaging studies to neurobiological research that seeks the relationship between the regional activity of specific neuronal processes and mental processes.

Shulman and Rothman PNAS, 1998 Psychology CMRglc NeuronalNeuroenergetics MentalImage Signal Neuroscience CMRO2 CBF

Let’s back up… What do we know for sure about fMRI?

280 million Hb molecules per red blood cell Hemoglobin Molecule

L. Pauling and C. Coryell The Magnetic Properties and Structure of Hemoglobin, Oxyhemoglobin and Carbonmonoxy hemoglobin, PNAS, vol. 22, pp , Different magnetic properties of hemoglobin and deoxyhemoglobin

Hemoglobin Molecule

Baseline Task from Mosley & Glover, 1995 Blood Oxygenation Level Dependent Imaging

Brain or Vein?

Large Vessel Contributions to BOLD Contrast Virchow-Robin Space

Intravascular Perivascular Extravascular

3 z = 1.64 Small Large Courtesy of Dr. Allen Song, Duke University Isotropic Diffusion Weighted Spiral Imaging at 4T

9 sec a b

Diffusion-weighted (b factor = 54) Diffusion-weighted (b factor = 108) Subject 41057, Slice 12, 4.0 Tesla ADC masked by BOLD activation BOLD activation (b factor = 0)

Diffusion-weighted (b factor = 54) Diffusion-weighted (b factor = 108) Subject 41037, Slice 183, 4.0 Tesla ADC masked by BOLD activation BOLD activation (b factor = 0)

Diffusion-weighted (b factor = 54) Diffusion-weighted (b factor = 108) Subject 41037, Slice 177, 4.0 Tesla ADC masked by BOLD activation BOLD activation (b factor = 0)

ADC masked by BOLD activation Subject 41037, Slice 177, 4.0 Tesla

Negative dips

Vanzetta and Grinvald, Science, 286: , 1999 Phosphorescence Decay Time (Oxyphor R2 oxygen tension-sensitive phosphorescent probe)

Vanzetta and Grinvald, Science, 286: , 1999 Phosphorescence Decay Time (Oxyphor R2 oxygen tension-sensitive phosphorescent probe)

Vanzetta and Grinvald, Science, 286: , 1999 Oxy Hb deoxy Hb

Berwick et al, JCBFM, 2002 Optical imaging of rat barrel cortex Hb02= oxyhemoglobin, Hbr = deoxyhemoglobin, Hbt = total blood flow

N. Logothetis, Nature Neuroscience, 1999 Functional Imaging of the Monkey Brain

Hu, Le, Ugurbil MRM, 1997 Early Response in fMRI

Hu, Le, Ugurbil MRM, 1997 Early Response in fMRI

What triggers blood flow?

Arterioles ( microns) precapillary sphincters Capillaries (5-10 microns) Venules (8-50 microns)

Tissue factors K + H + Adenosine Nitric oxide

C. Iadecola, Nature Neuroscience, 1998 Commentary upon Krimer, Muly, Williams and Goldman-Rakic, Nature Neuroscience, 1998 Neuronal Control of the Microcirculation

Krimer, Muly, Williams, Goldman-Rakic, Nature Neuroscience, 1998 Pial Arteries 10  m NoradrenergicDopamine

Krimer, Muly, Williams, Goldman-Rakic, Nature Neuroscience, 1998 Dopamanergic terminals associated with small cortical blood vessels 10  m

Krimer, Muly, Williams, Goldman-Rakic, Nature Neuroscience, 1998 Dopamanergic terminals associated with small cortical blood vessels 2  m 400 nm

Krimer, Muly, Williams, Goldman-Rakic, Nature Neuroscience, 1998 Perivascular iontophoretic application of dopamine s40-60 s

Let’s back up again… Why isn’t all the oxyHb used up?

Uncoupling…

glucose pyruvate Glucose 6 phosphate Fructose – 1,6-phosphate TCA cycle lactate Net +2 ATP Net +36 ATP glucose O2 CO2 + H20

Shulman and Rothman PNAS, 1998

Proposed pathway of glutamate / glutamine neurotransmitter cycling between neurons and glia, whose flux has been quantitated recently by 13 C MRS experiments. Action potentials reaching the presynaptic neuron cause release of vesicular glutamate into the synaptic cleft, where it is recognized by glutamate receptors post-synaptically and is cleared by Na + -coupled transport into glia. There it is converted enzymatically to glutamine, which passively diffuses back to the neuron and, after reconversion to glutamate, is repackaged into vesicles. The rate of the glutamate-to-glutamine step in this cycle (Vcycle), has been derived from recent 13 C experiments.

Sibson et al. PNAS, 1998

Heeger, Nature Neuroscience 2002

Ito et al. JCBFM, 2001

Relationship of BOLD to neuronal activity

Attwell and Laughlin, JCBFM, 2001 Brain Energetics

Attwell and Laughlin, JCBFM, 2001 Brain Energetics

Rees et al. Nature Neuroscience 2000

Heeger, Nature Neuroscience 2000

Lauritzen, JCBFM, 2001

Climbing Fiber Stimulation

Lauritzen, JCBFM, 2001 Climbing Fiber Stimulation

Lauritzen, JCBFM, 2001 Parallel Fiber Stimulation

Lauritzen, JCBFM, 2001 Harmaline IP synchronizes inferior olive

Smith et al. PNAS, 2002

Hyder et al. PNAS, 2002

Spatial co-localization?

How neuronal activity changes cerebral blood flow is of biological and practical importance. The rodent whisker-barrel system has special merits as a model for studies of changes in local cerebral blood flow (LCBF). Whisker-activated changes in flow were measured with intravascular markers at the pia. LCBF changes were always prompt and localized over the appropriate barrel. Stimulus- related changes in parenchymal flow monitored continuously with H2 electrodes recorded short latency flow changes initiated in middle cortical layers. Activation that increased flow to particular barrels often led to reduced flow to adjacent cortex. The matching between a capillary plexus (a vascular module) and a barrel (a functional neuronal unit) is a spatial organization of neurons and blood vessels that optimizes local interactions between the two. The paths of communication probably include: neurons to neurons, neurons to glia, neurons to vessels, glia to vessels, vessels to vessels and vessels to brain. Matching a functional grouping of neurons with a vascular module is an elegant means of reducing the risk of embarrassment for energy-expensive neuronal activity (ion pumping) while minimizing energy spent for delivery of the energy (cardiac output). For imaging studies this organization sets biological limits to spatial, temporal and magnitude resolution. Reduced flow to nearby inactive cortex enhances local differences Woolsey et al. Cerebral Cortex, 95: , 1996 Whisker Barrel Model

Yang, Hyder, Shulman PNAS, 93: , 1996 Rat Single Whisker Barrel fMRI Activation 7 Tesla 200  m x 200  m x 1000  m

Berwick et al, JCBFM, 2002 Optical imaging of rat barrel cortex Hb02= oxyhemoglobin, Hbr = deoxyhemoglobin, Hbt = total blood flow

Berwick et al, JCBFM, 2002 (a) Outside activated region, (b) ipsilateral whisker

Relationship between field potentials and functional MRI

LMY1

LTO10 DWT1 LSOP5 LPT6 LPT7 LTO4

SOP5 PT6 PT7 TO4 TO10 LG FG Pole V1-V2 MT

Timing of activations compared to neuronal activation

Subdural Electrode Strips

Face-Specific N200

Face-House Attention Task

Attend House Attend Face NBH1 CDOB1

Negative activations

Harel et al. JCBFM, 2002

9 sec a b

180° phase-reversed responses to faces among objects

41088

Is there evidence for inhibition?

RTP2-5LTTP2-2

- + Excitatory Inhibitory + - Face-specific cellWord-specific cell N200P200

Rat Olfactory Bulb Structural MRI Yang, Renken, Hyder, Siddeek, Greer, Shepherd, Shulman PNAS, 95: , Tesla 100  m x 100  m x 1000  m

Yang, Renken, Hyder, Siddeek, Greer, Shepherd, Shulman PNAS, 95: , 1998 Rat Olfactory Bulb fMRI Activation 7 Tesla 200  m x 200  m x 1000  m