November 17 & 18, 2005 1 UCSF Chimera Workshop, Fall 2005 Resource for Biocomputing, Visualization, and Informatics University of California at San Francisco.

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Presentation transcript:

November 17 & 18, UCSF Chimera Workshop, Fall 2005 Resource for Biocomputing, Visualization, and Informatics University of California at San Francisco Conrad Huang U C S F

2 Overview General format: –Short presentation/demonstration –Hands-on tutorial Topics may be domain-specific –Attend the topics of interest

3 Today’s Agenda Time TopicPresenter 9:00-10:45Introduction to UCSF ChimeraEric 10:45-11:00Break 11:00-12:00Exploring sequence-structure relationships with MultAlignViewer Elaine 12:00-1:30Lunch 1:30-2:15Screening docked ligands using ViewDockElaine 2:15-3:15MD Trajectories and structural ensemblesEric 3:15-3:45Break 3:45-4:30Displaying, defining and calculating attributesConrad 4:30-5:30General labTeam

4 Tomorrow’s Agenda Time TopicPresenter 9:00-10:00Large molecular assembliesTom 10:00-10:30Break 10:30-11:30Volume dataTom 11:30-1:00Lunch 1:00-2:00Producing images and moviesGreg 2:00-3:00Chimera scripts and demosGreg 3:00-3:30Break 3:30-??Panel discussionTeam

5 Today’s Presenters Conrad HuangChimera Developer Eric PettersenChimera Developer Elaine MengScientific Advisor Tom GoddardChimera Developer Greg CouchChimera Developer Scooter MorrisExecutive Director, RBVI

6 Acknowledgements Staff: –Dr. Tom Ferrin, Dr. Conrad Huang, Tom Goddard, Greg Couch, Eric Pettersen, Dan Greenblatt, Al Conde, Dr. Elaine Meng, Dr. John “Scooter” Morris Collaborators (partial list): –Patricia Babbitt, UCSF –Wah Chiu and Steven Ludtke, Baylor –John Sedat and David Agard, UCSF –David Konerding and Steven Brenner, UCB Funding: –NIH National Center for Research Resources –grant P41-RR01081 Further information: –