Techniques and Considerations for FIA Fragmentation Analysis Andrew Lister, Tonya Lister, Rachel Riemann and Mike Hoppus Northeastern Research Station,

Slides:



Advertisements
Similar presentations
WHAT IS ELINK? Thermoflow, Inc.
Advertisements

** The paper recommended (McGarigal and Cushman 2002) summarizes the fragmentation studies with the most recent and richest references on the topic. SPATIAL.
Decision Tree Rong Jin. Determine Milage Per Gallon.
GIS Overview. What is GIS? GIS is an information system that allows for capture, storage, retrieval, analysis and display of spatial data.
TREMA Tree Management and Mapping software Raintop Computing - Oxford.
ArcView and GMT – An Introduction to Two Simple GIS Systems Bill Langin EAS 781 9/18/02.
Dr. David Liu Objectives  Understand what a GIS is  Understand how a GIS functions  Spatial data representation  GIS application.
GPS to GIS: Collecting and Mapping Real-World Data Collect GPS data around your school, and import it into ArcView to create shapefiles and grids.
ESRM 250 & CFR 520: Introduction to GIS © Phil Hurvitz, KEEP THIS TEXT BOX this slide includes some ESRI fonts. when you save this presentation,
Monté Carlo Simulation MGS 3100 – Chapter 9. Simulation Defined A computer-based model used to run experiments on a real system.  Typically done on a.
Portfolio Manager—ICBA Members ENERGY STAR  Tools For Benchmarking and Tracking Energy Use.
Introduction to ModelingMonte Carlo Simulation Expensive Not always practical Time consuming Impossible for all situations Can be complex Cons Pros Experience.
Struts 2.0 an Overview ( )
How to Produce Statistical Graphics General Clinical Research Center August 15, 2005 Rachel Enriquez.
A Statistically Valid Method for Using FIA Plots to Guide Spectral Class Rejection in Producing Stratification Maps Mike Hoppus & Andrew Lister USDA-Forest.
Introduction to Systems Analysis and Design Trisha Cummings.
ESRM 250 & CFR 520: Introduction to GIS © Phil Hurvitz, KEEP THIS TEXT BOX this slide includes some ESRI fonts. when you save this presentation,
KCAIUG City Planning and Development- Kansas City, MO 3D Analyst1.
CompuCell Software Current capabilities and Research Plan Rajiv Chaturvedi Jesús A. Izaguirre With Patrick M. Virtue.
Adaptive Kernel Density in Demographic Analysis Richard Lycan Institute on Aging Portland State University.
Climate Response with DendroClim 2002
Automated Data Analysis National Center for Immunization & Respiratory Diseases Influenza Division Nishan Ahmed Data Management Training Cairo, Egypt April.
Introduction to MCMC and BUGS. Computational problems More parameters -> even more parameter combinations Exact computation and grid approximation become.
Using the Margins Command to Estimate and Interpret Adjusted Predictions and Marginal Effects Richard Williams
Planning for Inventory & Monitoring Chip Scott National Inventory & Monitoring Applications Center (FIA-NIMAC) Northern Research Station U.S. Forest Service.
Introduction to ArcView NPS Introduction to GIS: Lecture 2 Based on NINC, ESRI and Other Sources.
CFR 250/590 Introduction to GIS, Autumn 1999 Data Conversion & Export © Phil Hurvitz, data_export.ppt 1 Overview Why export? Converting feature.
ATN GIS Support ArcGIS: ArcToolbox.
ArcGIS: ArcToolbox. Goals Develop familiarity with ArcToolbox Integrated use of the different ArcGIS components in the context of a typical GIS project.
Software Development Process.  You should already know that any computer system is made up of hardware and software.  The term hardware is fairly easy.
ICT IGCSE.  Introducing or changing a system needs careful planning  Why?
Using Random Forests to Classify W + W - and tt events J. Lovelace Rainbolt, Thoth Gunter, Michael Schmitt CIERA Pizza Discussion Oct 20, Oct-20141Random.
Graphing and statistics with Cacti AfNOG 11, Kigali/Rwanda.
PCB 3043L - General Ecology Data Analysis. OUTLINE Organizing an ecological study Basic sampling terminology Statistical analysis of data –Why use statistics?
What is SPSS  SPSS is a program software used for statistical analysis.  Statistical Package for Social Sciences.
WRITING REPORTS Introduction Section 0 Lecture 1 Slide 1 Lecture 6 Slide 1 INTRODUCTION TO Modern Physics PHYX 2710 Fall 2004 Intermediate 3870 Fall 2015.
240-Current Research Easily Extensible Systems, Octave, Input Formats, SOA.
The Metadata Tool Custom Metadata Tool Who this tool is for: This tool designed to be used a data management system. This tool is geared more for the.
GIS System Design for the Coastal Storms Initiative Nazila Merati OAR/PMEL & OAR Representative to NOAA Enterprise GIS Chris Moore – OAR/PMEL Tiffany C.
Copyright © 2013, 2009, and 2007, Pearson Education, Inc. Chapter 14 Comparing Groups: Analysis of Variance Methods Section 14.1 One-Way ANOVA: Comparing.
This document gives one example of how one might be able to “fix” a meteorological file, if one finds that there may be problems with the file. There are.
Developing the RHESSys / ArcView Integrated Modeling Environment David Tenenbaum Univ. of North Carolina-Chapel Hill.
PCB 3043L - General Ecology Data Analysis. PCB 3043L - General Ecology Data Analysis.
CONDUCTING TESTS FOR STATISTICALLY-SIGNIFICANT DIFFERENCES USING FOREST INVENTORY DATA James A. Westfall Scott A. Pugh John W. Coulston U.S. Forest Service.
Intermediate 2 Computing Unit 2 - Software Development.
PCB 3043L - General Ecology Data Analysis.
Random Forests Ujjwol Subedi. Introduction What is Random Tree? ◦ Is a tree constructed randomly from a set of possible trees having K random features.
Phil Hurvitz Avian Conservation Lab Meeting 8. March. 2002
Surveillance and Population-based Prevention Department for Prevention of Noncommunicable Diseases Displaying data and interpreting results.
Lesson 29: Building a Database. Learning Objectives After studying this lesson, you will be able to:  Identify key database design techniques  Open.
Learning Photographic Global Tonal Adjustment with a Database of Input / Output Image Pairs.
General Introduction. Developed by USGS Freely available via Internet
William Perry U.S. Geological Survey Western Ecological Research Center Geography 375 Final Project May 22, 2013.
The Data Collection and Statistical Analysis in IB Biology John Gasparini The Munich International School Part II – Basic Stats, Standard Deviation and.
© Chinese University, CSE Dept. Software Engineering / Software Engineering Topic 1: Software Engineering: A Preview Your Name: ____________________.
PCB 3043L - General Ecology Data Analysis Organizing an ecological study What is the aim of the study? What is the main question being asked? What are.
PCB 3043L - General Ecology Data Analysis.
Zebrafish Research Data Analysis Choices.
Zebrafish Research Data Analysis Choices.
Microsoft Office Illustrated
Zebrafish Research Data Analysis Choices.
Spatial Data Models Raster uses individual cells in a matrix, or grid, format to represent real world entities Vector uses coordinates to store the shape.
Introduction to Systems Analysis and Design
TallTimber & TimberPad: Software and Support for Forest Inventory
COCOMO Models.
Raster Data Analysis.
2018 NRS FIA Management Team Meeting Batch EVALIDator – EVALIDator API December 11-12, 2018 — Manhattan, Kansas API by Pat Miles Presented by Scott Pugh.
Amos Introduction In this tutorial, you will be briefly introduced to the student version of the SEM software known as Amos. You should download the current.
R Statistical Language
Scalable light field coding using weighted binary images
Presentation transcript:

Techniques and Considerations for FIA Fragmentation Analysis Andrew Lister, Tonya Lister, Rachel Riemann and Mike Hoppus Northeastern Research Station, Newtown Square, PA

Goals of talk 1. Emphasize the importance of making it FIA’s business to characterize fragmentation 2. Show some examples of how fragmentation products might be of interest to analysts and customers 3. Illustrate exactly how it is that FIA units can analyze fragmentation using free or inexpensive software and readily- available data---easily!

61 % Forest 62 % Forest Do the statistics on total or proportion of forest land tell the whole story?

Similarly, do the FIA statistical and analytical reports tell us what we want to know? Figure 1. Area by land class, Massachusetts, 1998 (Source: Table 1).

Do they help us analyze change in a sophisticated manner? Unit Percent change Western Massachusetts1,3171, Worcester Eastern Massachusetts1,2191, State total3,2243, Figure 2. Area (in thousand acres) of forest land and percent change, Massachusetts, 1985 and 1998 (Source: Table 48).

How could analysis be enhanced with a breakdown of landuse by county summarized from a continuous dataset, not a statistical estimate?

How are average forest patch size and area of forest related? What’s going on here? ALL FOREST CORE AREA

How are average forest patch perimeter and area of forest related?

How about patch size and ownership?

What about analysis of the quality of forest edge in a county? E.g., Agriculture-Forest edge is very different from Urban-Forest edge.

Are volume of trees on forest land and edge density related?

Or are they related because edge density and average core area patch size are related?

Multi-colinearity is a problem in many fragmentation analyses. Before conducting the analysis, ask: What is the biological significance of a metric?

The point is, the inclusion of forest fragmentation reporting into the FIA framework will add a great deal of depth to our analytical capabilities.

Fragmentation Statistics 12 13

Worcester County Core Area Distribution

Methods for Calculating Fragmentation Statistics

Pros and Cons: Patch Analyst/Fragstats-Arcview Pros: very well documented extensively tested large user community uses native GIS file formats (Arc-Info grids, coverages and shapefiles) easy to use GUI output is very nicely formatted Cons: will not work on very large areas (~20 x 20 km is a chore) crashes unpredictably consumes a lot of computer resources

GUI for Patch Analyst -ArcView

Pros and Cons: APACK Pros: well documented growing user community EXTREMELY efficient use of computer resources can work on very large areas (easily 100 x 100 km, at least) can run in batch mode (run multiple analyses at once) produces most of Fragstats metrics, and some additional ones output is versatile Cons: does not use native GIS format (but easy to convert) output not quite as well-formatted as Patch Analyst

GUI for APACK

Pros and Cons: Arc-Info – Arc-View Pros: “old standby” relatively stable can run very complex analyses over which you have control uses GIS and other input formats very large user community well-documented Cons: relatively unstable – cryptic error messages (a.k.a. Dark Info) consumes a lot of system resources (Arc-View) no GUI (Arc-Info) many analyses are too complex for intermediate programmers not many shared landscape fragmentation routines

7 Steps for Calculating Fragmentation Metrics for Any State in North America 1. Download free MRLC satellite image; format for Arc-Info - 15 minutes 2. Convert to Erdas.gis format file - 2 minutes 3. Create simple batch file in Microsoft Excel -10 minutes 4. Type in one command at DOS prompt -2.7 seconds 5. Wait while APACK calculates statistics for each county minutes 6. Concatenate output files -10 seconds 7. Format output -15 minutes

total time elapsed: 60 minutes and 12.7 seconds Sampling Error 3%

Conclusions Forest fragmentation statistics are extremely informative, and we should begin to produce them for at least each county in our areas. There is some danger, however, of implementing the lottery approach; we should always ask what is the biological significance of a metric before we conduct an analysis. The metrics are simple to calculate with free or readily-available raw data and software.

Thank You