Ploidy Makeup Analysis of Hypericum perforatum Seed Population Thurman Redhouse Jr. 1,3, Luping Qu 2, Mark Widrlechner 1. New Mexico State University,

Slides:



Advertisements
Similar presentations
Primary Culture of Chick Myocyte. Establishment of primary cultures from various sources Consider:  Whether to use normal or tissue derivative tissue.
Advertisements

DNA cell cycle analysis is affected both by the type of instrument used and the binding dye Ryan Duggan and David Leclerc The University of Chicago Flow.
ViahanceTM: Dead Cell, Stripped Nuclei and Free Oligonucleotide Removal Kit Instructions ViahanceTM dead cell removal kit enhances the viability ratio.
Troublesome material: how to deal with? Jan Suda Department of Botany, Faculty of Science, Charles University Institute of Botany, Academy of Sciences.
Biochemical Oxygen Demand (BOD) CE Lab. Introduction The Biochemical Oxygen Demand (BOD) test measures the oxygen consumed by microorganisms in.
OSMOTIC FRAGILITY OF RED BLOOD CELLS.
Reactive Oxygen Species (ROS) Mitochondrion and ROS Electron Transport Chain: Complexes I-V.
Experiment No 4. 5 Experiment Material and Chemicals Overview Introduction Procedure Objective
Extraction of Nucleic Acids (Genomic DNA, mRNA and Plasmid DNA)
Extraction and isomerization rates of α-acids for bittering beer
ALGALTOXKIT F Test procedure. 1 PREPARATION OF ALGAL CULTURING MEDIUM - VOLUMETRIC FLASK (1 liter) - VIALS WITH NUTRIENT STOCK SOLUTIONS A (2 vials),
Lab 6 Isolation Techniques
Extraction of Human DNA
Modified Method for Combined DNA and RNA Isolation From peanut and Other Oil Seeds Phat M. Dang and Charles Y. Chen USDA-ARS, National Peanut Research.
These reports are an opportunity for you to explain what you did and what you found so that someone else can understand it. Practice writing. Need a full.
Laboratory Solutions In the laboratory, we will be using different concentration of chemical solutions. Each protocol will require different solutions.
Gaining Practical Science Experience: A Must for Teachers Marcus Begay¹, Lisa Burke², Steve Hanlin², Benjamin Herman³, Carolyn Lawrence²³,Candice Gardner².
DNA ISOLATION. INTRODUCTION  DNA isolation is an extraction process of DNA from various sources. The scientist must be able to separate the DNA from.
Important points on DNA isolation
Plant Germplasm Conservation Introduction The purpose of this project was to gain an understanding of Maize Germplasm Conservation and its impact and to.
Using Simple Sequence Repeats to Identify the Presence of Ab10 in Maize Alexandra Volker 1, Von Mark Cruz 2, Candice Gardner 2,3, Carolyn Lawrence 2,3,4.
Extraction and Quantitation of DNA From E. coli
Naagarajan Narayanan Vignesh Muthuvijayan* Department of Biotechnology
A convenient point of access to communicate information on molecular characterization and traditional uses of maize germplasm Titus Harrison 1, Trent Seigfried.
5. Internet Exploration:
Abstract Maize, (Zea mays L. ssp., corn) Abnormal Chromosome ten (Ab10) is an uncommon variant of chromosome 10. Ab10 causes a segregation abnormality.
David McFall Grade 9 Central Catholic High School.
Cytotoxicity of Echinacea Ethanol Fractions and Lipopolysaccharides (LPS) on Raw Mouse Macrophages. Leslie R. Nelson 1, Xiaozhu Zhang 2, Nan Huang.
Experiment 11 Isolation and purification of nuclei.
CELL ENVELOPE PREPARATION / SOLUBILIZATION Kris-itd.unair.ac.id (for education purpose only)
CAPE Biology Workshop on Concepts in Biotechnology & Genetic Engineering Prepared and presented by Dr. Marcia E. Roye.
Photosynthesis & e - transport Pathway thinking How?Why?
DNA FINGERPRINTING.
Manual Extraction of DNA from The Blood. - Blood Sample. - Distilled water. Dionized water. - Ice and Plastic bucket.- Materials.
Lab 5 DNA Extraction.
ATP Bioluminescence for Monitoring Drinking Water Quality
Manual Extraction of DNA from The Blood. Materials - Blood Sample. - Distilled water. Dionized water. - Ice and Plastic bucket.-
1. Be introduced to the laboratory techniques involved in DNA extraction. 2. Test DNA integrity using gel electrophoresis.
Photosynthesis Lab - Elodea & Bromothymol Blue
Tubes centrifuged at room temperature for 10,000 rpm for 10 mins (to precipitate bacterial cells) (Control) E.coli (24h old culture) a loopful /tube was.
L = ________ ml what piece of equipment? M = ______mM 3.68 uL = _______ mL what piece of equipment? mg = _______ g what piece of equipment?
KAU-Faculty of Science- Biochemistry department Analytical biochemistry lab (Bioc 343) 2012 T.A Nouf Alshareef Lab (8):
Blood Grouping Slide & Tube Methods
TECHNETIUM (99mTc) MACROSALB INJECTION Definition Technetium (99mTc) macrosalb injection is a sterile, a pyrogenic suspension of human albumin in the form.
By: Kate Hotard Nicholls State University
PLASMID ISOLATION AND ANALYSIS Part III Plasmid Isolation.
Identification of Genetically Modified Organisms in Foodstuffs.
DNA Extraction from human blood
In vitro differentiation of germ cells from nonobstructive azoospermic patients using three-dimensional culture in a collagen gel matrix  Jae-Ho Lee,
Red Blood Cell (RBCs) Count
© SSER Ltd..
By: Ashneet Biln and Carling Gales
BCH 447- Metabolism: Mid term date: Wed 9/2/ /11/2017
Determination of Hematocrit value (H)
BCH 447- Metabolism: Mid term date: Mon 7/2/ /11/2017
MICROENCAPSULATION OF FISH OIL BY
Lab no. 10 Plasmid DNA isolation.
DNA Isolation from Haman Blood Cells
Extraction and isomerization rates of α-acids for bittering beer
Volume 11, Issue 6, Pages (June 2005)
TECHNETIUM (99mTc) MACROSALB INJECTION
Practical Blood Bank Lab 1 ABO Grouping.
Abstract: The barcoding project helps identify all the organisms in our world. Barcoding Aloe vera will help scientist determine the difference between.
Characteristics of Living Things
Lab no. 10 Plasmid DNA isolation.
Volume 11, Issue 6, Pages (June 2005)
The cell The basic unit of any living organism.
Volume 8, Issue 20, Pages (October 1998)
RISAP Is a Peripheral Membrane Protein That Interacts with F-Actin
Presentation transcript:

Ploidy Makeup Analysis of Hypericum perforatum Seed Population Thurman Redhouse Jr. 1,3, Luping Qu 2, Mark Widrlechner 1. New Mexico State University, Las Cruces, New Mexico; 2. North Central Regional Plant Introduction Station, Ames, Iowa; 3. Iowa State University, Ames, Iowa Abstract Populations of Hypericum perforatum may include diploid, tetraploid, and hexaploid cytotypes. Tetraploid populations are by far the most common and likely the ancestral type and is capable of asexual reproduction by apomixes. A population with mixed ploidy types may affect detrimentally on seed regeneration and germplasm conservation. Analysis of the ploidy makeup is done through flow cytometry. The seeds of three H. perforatum accessions were obtained from the North Central Regional Plant Introduction Station (NCRPIS) in Ames, Iowa. Through the flow cytometry analysis of individual seed samples we will understand whether the accession contains different ploidy types and the percentage of each ploidy type in an accession. By comparing the ploidy levels of the endosperm tissue with that of the embryo tissue, we may also be able to determine which seeds were produced through normal sexual reproduction or asexual reproduction (apomixes). The results will be useful in management of H. perforatum germplasm. Introduction H. perforatum is referred to mostly as St. John's wort. It works as an anti- inflammatory, antiseptic, and antiviral. In Native American tribes such as the Cherokee, the Iroquois, and the Montagnais, they have used St. John’s wort for the treatments of fever, cough, nosebleed, snakebites and intestinal problems. Although research on medicinal plants focuses mainly on chemical properties of the plants, research on the genetics and germplasm are being done for future aid towards the success of the medicinal plants. Materials and Methods The H. perforatum seeds are obtained from the NCRPIS. Each individual seed was placed in a 5 mL tubes. An amount of 1 mL of nuclei stabilizing buffer (15 mM HEPES, 1 mM EDTA, 80 mM KCl, 20 mM NaCl, 300 mM Sucrose, 0.2% Triton X-100, 0.5 mM Spermine tetrahydrochloride, 0.25 mM PVP) was applied and the seed was broken down with a homogenizer, (Omni International 1000; Waterbury, CT.) in an effort to release the nuclei within the seed. Again 1 mL was added and then filtered. After filtration the solution was then centrifuged for 6 minutes at a speed of 800O rpm. With the nuclei settled at the bottom of each tube, the supernatant was discarded and re-suspeded with 250 µL of staining buffer(10 mM MgSO4, 50 mM KCl, 5 mM HEPES, 0.1% DL-Dithiothreitol, 2.5% Titon X-100, 100 mg/mL Propidium Iodide). The solutions were then read through a flow cytometry where the stained nuclei will be measure in terms of its florescence detected within the machine. Results Conclusion Hypericum perforatum accessions tested in this investigation contains mixed ploidy types. Flow cytometry is a very effective and less time consuming method for evaluation of ploidy types and can also be used in determining reproductive pathways in plants by analyzing seed samples. Acknowledgments We thank the USDA-ARS, National Science Foundation, and Department of Energy for funding this work. Thank you to everyone at the George Washington Carver Internship Program. Carolyn Lawrence, Candice A.C. Gardner and everyone at the North Central Regional Plant Introduction Station, Ames, Iowa. Preparation for Flow Cytometry Analysis One see in one tube Break Seed with Homogenizer Add 1 mL of buffer Filter Centrifuge 6 minutes at 8000 RPM Discard supernatant Resuspend with 250 DAPI-staining buffer Flow Cytometry Add 1 mL of buffer Flow Cytometry All flow cytometry was performed with a BD Biosciences (San Jose, CA) FACSCanto equipped with a 488 nm laser and 610/20 emission filter. One hundred seed samples were analyzed in each accession. Reproductive pathways were determined by calculating the ratios of embryo and endosperm nuclei DNA contents A) diploid (2x = 16) embryo with tetraploid (4x = 32) endosperm B) tetraploid embryo with decaploid (10x = 80) endosperm C) hexaploid (6x = 48) embryo with decaploid endosperm.