GBIF Today and Tomorrow

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Presentation transcript:

GBIF Today and Tomorrow Donald Hobern, GBIF Executive Secretary Science Symposium, New Delhi, India, 17 September 2014

Concern – Prescence-only data To monitor biodiversity trends, we need more than just presence data

Extending GBIF for sample-based data Species Event Quantity Sample size Protocol Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect Aglais urticae 4 individuals Inachis io 1 individual Species Event Quantity Sample size Protocol Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect Aglais urticae 8 individuals Thecla betulae 2 individuals Species Event Quantity Sample size Protocol Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect Aglais urticae 3 individuals Comparable Species Event Quantity Sample size Protocol Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect Vanessa cardui 8 individuals Aglais urticae 3 individuals Species Event Quantity Sample size Protocol Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect Vanessa cardui 4 individuals Aglais urticae 1 individuals Species Event Quantity Sample size Protocol Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect Aglais urticae 2 individuals Not comparable Species Event Quantity Sample size Protocol Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey Sprattus sprattus 71 individuals

Concern – Disconnected data It is hard for data publishers to know how their data have been used Researchers can’t fix problems with data

GBIF and Digital Object Identifiers DOI – Digital Object Identifier Persistent resolvable identifiers Standard for published papers Simplify citing references Used in measuring impact

GBIF and Digital Object Identifiers GBIF.org DataCite Denmark GBIF registers datasets without existing DOIs with DataCite Denmark IPT Any tool Any tool National DataCite Service Publisher uses IPT to register dataset with DataCite Publisher establishes DOI externally Publisher does not provide DOI Data Publishers

GBIF and Digital Object Identifiers GBIF download Data Data attribution Download DOI Cleaned data Data Data attribution Paper Paper DOI Dataset DOI User publishes paper User cleans data Published paper can give resolvable links to GBIF download and/or to cleaned dataset Researcher User searches for data through GBIF.org User deposits cleaned dataset in a repository and gets DOI for dataset GBIF.org Download history Download 1 . . . DataCite Denmark GBIF assigns DOIs to data downloads GBIF.org creates a download data set

GBIF and Digital Object Identifiers GBIF download Data Data attribution Download DOI Cleaned data Data Data attribution Paper Paper DOI Researcher Reader Dataset DOI Cite data sources Linked results to data Suggest data corrections Retrieve source data Reproduce results GBIF.org Download history Download 1 . . . Data Publisher GBIF Discover data usage Receive suggested data corrections Monitor data usage Enhance fitness-for-use IPT Any tool Any tool

Concern – Fitness-for-use GBIF does not yet make use of all relevant expert knowledge to improve data

GBIF and GLOBALLY CONNECTED DATA Species Occurrence Catalogue Taxon Name Catalogue GBIF Data Index Catalogue of Life Institution Catalogue Collection Catalogue Taxon Concept Catalogue Sequence Catalogue Publication Catalogue Comprehensive service-centred catalogues GBIF in future should use services from a shared catalogue to get the best concept (and to add it if not already included) Published data sets Catalogues with compatible services form an ecosystem to organise access to distributed biodiversity information Catalogues are also best place of offer tools and services to support and organise annotations and corrections Species Occurrence Sequence Taxon Name Publication Institution Collection Taxon Concept Species occurrence record includes scientific name and no explicit species concept Conceptual biodiversity data model