Toward High-Throughput Synthesis of Complex Natural Product-Like Compounds in the Genomics and Proteomics Age  Prabhat Arya, Reni Joseph, Doug T.H Chou 

Slides:



Advertisements
Similar presentations
Prepared by : Malak Eshtayah
Advertisements

Organic Chemistry William H. Brown & Christopher S. Foote.
Alcohols: Structure & Synthesis
CHAPTER 12 Substituted Benzene 12.1 Alkylbenzenes (Ar-R)
Year 3 CH3E4 notes: Asymmetric Catalysis, Prof Martin Wills
Chapter 16 Organic Chemistry In this chapter, we will explore basic organic concepts including nomenclature, structure, and functional groups.
Tetrahydroisoquinoline: Oxidative imine formation, nucleophilic addition reactions and asymmetric selectivity James Fuster, Dr. Rina Soni, Professor Martin.
An intriguing example of how chirally enriched amino acids in the prebiotic world can generate sugars with D-configuration & with enantioenrichment: Cordova.
John E. McMurry Paul D. Adams University of Arkansas Lecture 11 (Chapter 9) Alkyne Reactions.
CARBON CARBON EVERYWHERE!! Macromolecules. Importance of carbon Single Double bonds with Oxygen Single Double bonds with Nitrogen Single Double Triple.

1 Year 3 CH3E4 notes: Asymmetric Catalysis, Prof Martin Wills Reorganised to highlight key areas to learn and understand. You are aware of the importance.
Chapter 8 Aromaticity Reactions of Benzene. Aromatic compounds undergo distinctive reactions which set them apart from other functional groups. They.
Synthetic Strategies toward Substituted Benzenes 16-5 To obtain substitutions in positions incompatible with the directing sense of substituents requires.
Chapter 15 Reactions of Aromatic Compounds. Chapter 152  Electrophilic Aromatic Substitution  Arene (Ar-H) is the generic term for an aromatic hydrocarbon.
1 Year 3 CH3E4 notes: Asymmetric Catalysis, Prof Martin Wills You are aware of the importance of chirality. This course will focus on asymmetric.
Ye Zhu 09/02/10 Burgess’s Group Meeting Chiral Ligands On A Spiro Scaffold for Transition-Metal- Catalyzed Asymmetric Reactions Work by Prof. Zhou Qi-Lin.
Organic Pedagogical Electronic Network Attachment of Molecular Catalysts on Solid Supports - Rh Complex on a Silica Support Jones Group, Georgia Tech Davies.
Chapter 5-2. Chemistry of Benzene: Electrophilic Aromatic Substitution
Characterization of E and Z-α-methylene γ-butyrolactones OBJECTIVE  The purpose of this study is to develop a new method for construction of the aryltetralignan.
Guided by: H.S.Tailor Pacific school of engineering, Surat Sub :Application of following reaction with mechanism.
Chemistry for tomorrow’s world A roadmap for the chemical sciences Dr Anne Horan Royal Society of Chemistry.
Enantioselective Reactions Catalyzed by Iron Complexes Pablo Pérez.
John E. McMurry Paul D. Adams University of Arkansas PREVIEW TO CARBONYL CHEMISTRY.
6 th J-NOST CONFERENCE DATE: VENUE: DST Auditorium UNIVERSITY OF HYDERABAD DATE: VENUE: DST Auditorium UNIVERSITY OF HYDERABAD DISCOVERY.
Organic Chemistry Second Edition Chapter 11 David Klein
Asymmetric Synthesis of (S) - Metoprolol
Total Synthesis of (±)-Cylindricine C
Addition Reactions Synthesis
8. Alkynes: An Introduction to Organic Synthesis
Mycolic Acids: Structures, Biosynthesis, and Beyond
Chapter 9 Alkynes: An Introduction to Organic Synthesis
Stereoselective Tin-Free Radical Reactions
CARBON CARBON EVERYWHERE!!
Heterocyclic Chemistry
Volume 15, Issue 5, Pages (May 2008)
8. Alkynes: An Introduction to Organic Synthesis
Scratch n’ Screen for Inhibitors of Cell Migration
Facilitating the Design of Fluorinated Drugs
JAK3 Specific Kinase Inhibitors: When Specificity Is Not Enough
Volume 7, Issue 3, Pages (March 2000)
Chuck Merryman, Rachel Green  Chemistry & Biology 
KC Nicolaou, JA Pfefferkorn, F Schuler, AJ Roecker, G-Q Cao, JE Casida 
Phase I Functionalization
Martin D Burke, Gojko Lalic  Chemistry & Biology 
Chemical Dimerizers and Three-Hybrid Systems
Prabhat Arya, Reni Joseph, Zhonghong Gan, Bojana Rakic 
Benjamin T Houseman, Milan Mrksich  Chemistry & Biology 
Volume 21, Issue 5, Pages (May 2014)
Volume 15, Issue 10, Pages (October 2008)
Aptamer Structures Chemistry & Biology
Reeling in the Catch: Advancing Cleavable Linkers for Proteomics
Chapter 9 Alkynes: An Introduction to Organic Synthesis
Volume 16, Issue 10, Pages (October 2009)
8. Alkynes: An Introduction to Organic Synthesis
Volume 1, Issue 6, Pages (December 2016)
A Suppression Strategy for Antibiotic Discovery
Volume 16, Issue 10, Pages (October 2009)
Claisen Rearrangement
A Quick Diversity-Oriented Amide-Forming Reaction to Optimize P-Subsite Residues of HIV Protease Inhibitors  Ashraf Brik, Ying-Chuan Lin, John Elder,
Volume 20, Issue 10, Pages (October 2013)
Hideki Kubota, Jongwon Lim, Kristopher M Depew, Stuart L Schreiber 
Evolving new types of enzymes
Click Chemistry in Complex Mixtures: Bioorthogonal Bioconjugation
Allosteric drugs: thinking outside the active-site box
Matthias Brewer, The University of Vermont, Burlington Vermont, 05405
John E. Dominy, Francisca Vazquez, Pere Puigserver  Cancer Cell 
1. Palladium Catalyzed Organic Transformations
Volume 20, Issue 3, Pages (March 2013)
Aptamers and SELEX in Chemistry & Biology
Presentation transcript:

Toward High-Throughput Synthesis of Complex Natural Product-Like Compounds in the Genomics and Proteomics Age  Prabhat Arya, Reni Joseph, Doug T.H Chou  Chemistry & Biology  Volume 9, Issue 2, Pages 145-156 (February 2002) DOI: 10.1016/S1074-5521(02)00105-9

Figure 1 A Few Examples of Bioactive, Complex Natural Products that Have Been Challenging Targets for the Synthetic Community Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 2 In the Area of Diversity-Oriented Synthesis, Schreiber et al.'s Approach to Obtaining a Highly Functionalized Tetracyclic Template Leading to Natural Product-Like Small-Molecule Libraries Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 3 An Example of Diversity-Oriented Synthesis in which the Tetracyclic Template 3.1 Has Been Utilized for the Introduction of Three Diversity Sites Diversity sites include the Pd(II)-mediated carbon-carbon bond formation from the iodobenzene moiety, an amine-mediated opening of the lactone ring, and the derivatization of -COOH and -OH groups. Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 4 Another Expample of the Diversity-Oriented Synthesis of Natural Product-Like Compounds Here, Schreiber and coworkers have utilized a Ugi reaction followed by the ring closing metathesis approach to obtain 4.3, the bis-allyl derivative of the Ugi product. Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 5 An Example of the Stereoselective Synthesis of a 1,3-di-OH Syn-Derivative, 5.2, from the Chiral Epoxide 5.1 This reaction led to the synthesis of chiral, 1,3-dioxane derivatives on solid support. Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 6 To Obtain a Small Molecule-Based, Heterodimeric Compound Library, Verdine and Coworkers Utilized Evans' Syn Aldol Methodology to Synthesize the Intermediate 6.6. After a few modifications, the derivative 6.8 anchored onto solid support was subjected to ring-closing methathesis, giving the tetrahydrooxazepines. Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 7 Shair and Coworkers Developed a Biomimetic-Type Approach that Involves the Cycloaddition Reaction with Electron-Rich and Electron-Deficient Phenolic Derivatives This strategy was proven to be highly efficient for the synthesis of natural product-like (i.e., carpanone) polycyclic derivatives. Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 8 Another Example of a Biomimetic-Type Approach, reported by Shair and Coworkers, in which the Oxidation of the Phenolic Moiety and Subsequent Hetero-Michael-Type Reactions on Solid Phase Are the Key Steps Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 9 Schreiber and Coworkers Developed a Solid-Phase Asymmetric Synthesis of Medium-Ring Derivatives Having a Chiral Biaryl Moiety This synthesis was accomplished from the chiral di-iodoaryl derivative by application of the chemistry developed by Lipshutz and coworkers. Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 10 Using Ring-Closing Methathesis as a Key Step, Schreiber and Coworkers Reported the Synthesis of Macrocyclic Derivatives, 10.8, on Solid Phase These derivatives could further be subjected to macrocyclic control-derived, stereoselective transformations. Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 11 Based upon the Indolactam Natural Product, a Small-Molecule Library Synthesis Was Reported by Waldmann and Coworkers The reductive amination and coupling of the iodoaryl moiety with different alkynes were two key steps. Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 12 Several Bioactive, Polyphenolic-Derived Natural Products Contain 2,2-Dimethylbenzopyran Moieties A few examples of this category are shown in this figure. Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 13 Nicolaou and Coworkers Have Shown that Ortho-Prenylated Phenols upon Reaction with Selenium-Functionalized Resin Give 2,2-Dimethylbenzopyran Derivatives Anchored onto Solid Support The cleavage that forms the support could be achieved under oxidative conditions (e.g., H2O2), giving 3,4-dehydro-benzopyrans. Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 14 The Benzopyran Derivative Having a Phenolic -OH Anchored onto Solid Support, 14.1, Could be Glycosylated under the Standard Glycoside Bond-Forming Reaction Conditions Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 15 Nicolaou and Coworkers Reported the Synthesis of the Indoline Template Anchored onto Solid Support, 15.2, from Ortho-Allylaniline upon Reaction with Selenenyl Bromide Resin in the Presence of the Lewis Acid The cleavage of the resin could be achieved under free radicals-mediated reaction conditions (nBu3SnH, catalytic AIBN). Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 16 α-Sulfonated Keto Derivatives were Synthesized on Solid Phase by Nicolaou and Coworkers In the approach of Nicolaou and coworkers, the epoxide ring is opened upon treatment with the immobilized sulfonic acid. Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 17 A Few Examples of Bioactive, Natural Products as Kinase Inhibitors Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 18 Solid-Phase Approaches by Schultz and Coworkers for the Synthesis of Purine-Based, Natural Product-Like Small-Molecule Libraries Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)

Figure 19 Examples of Purine-Based Natural Products, such as Purvalanol and Myoseverin, with CDK2 Cyclin-Inhibitory Effects Chemistry & Biology 2002 9, 145-156DOI: (10.1016/S1074-5521(02)00105-9)