Advances in Event-Related fMRI Design

Slides:



Advertisements
Similar presentations
1 st Level Analysis: design matrix, contrasts, GLM Clare Palmer & Misun Kim Methods for Dummies
Advertisements

Detecting Conflict-Related Changes in the ACC Judy Savitskaya 1, Jack Grinband 1,3, Tor Wager 2, Vincent P. Ferrera 3, Joy Hirsch 1,3 1.Program for Imaging.
Designing a behavioral experiment
All slides © S. J. Luck, except as indicated in the notes sections of individual slides Slides may be used for nonprofit educational purposes if this copyright.
: To Block or Not to Block?
Rapid-Presentation Event-Related Design for fMRI
Efficiency in Experimental Design Catherine Jones MfD2004.
Design Efficiency Tom Jenkins Cat Mulvenna MfD March 2006.
Advances in Event-Related fMRI Design Douglas N. Greve.
Issues in Experimental Design fMRI Graduate Course October 30, 2002.
FMRI Methods Lecture7 – Review: analyses & statistics.
Functional Magnetic Resonance Imaging ; What is it and what can it do? Heather Rupp Common Themes in Reproductive Diversity Kinsey Institute Indiana University.
fMRI Task Design Robert M. Roth, Ph.D.
 Descriptive Methods ◦ Observation ◦ Survey Research  Experimental Methods ◦ Independent Groups Designs ◦ Repeated Measures Designs ◦ Complex Designs.
Issues in Experimental Design fMRI Graduate Course October 26, 2005.
1 Time Series Analysis of fMRI II: Noise, Inference, and Model Error Douglas N. Greve
Group Analysis Individual Subject Analysis Pre-Processing Post-Processing FMRI Analysis Experiment Design Scanning.
Dependent-Samples t-Test
Thomas Andrillon, Sid Kouider, Trevor Agus, Daniel Pressnitzer 
FMRI experimental design and data processing
The General Linear Model
Basics of Experimental Design for fMRI: Event-Related Designs
The General Linear Model (GLM): the marriage between linear systems and stats FFA.
Event-related fMRI demo
Attention Narrows Position Tuning of Population Responses in V1
Volume 69, Issue 3, Pages (February 2011)
The General Linear Model (GLM)
Volume 27, Issue 7, Pages (April 2017)
Illusory Jitter Perceived at the Frequency of Alpha Oscillations
Optimization of Designs for fMRI
Analysis of the Neuronal Selectivity Underlying Low fMRI Signals
The General Linear Model
Signal and Noise in fMRI
fMRI Basic Experimental Design – event-related fMRI.
Thomas Andrillon, Sid Kouider, Trevor Agus, Daniel Pressnitzer 
Caspar M. Schwiedrzik, Winrich A. Freiwald  Neuron 
Experimental Design FMRI Graduate Course (NBIO 381, PSY 362)
Repeated Measures Designs
Nori Jacoby, Josh H. McDermott  Current Biology 
Volume 66, Issue 6, Pages (June 2010)
Hypothesis Testing.
Psych 231: Research Methods in Psychology
Psych 231: Research Methods in Psychology
Vincent B. McGinty, Antonio Rangel, William T. Newsome  Neuron 
Psych 231: Research Methods in Psychology
Caspar M. Schwiedrzik, Winrich A. Freiwald  Neuron 
Binocular Rivalry and Visual Awareness in Human Extrastriate Cortex
The General Linear Model
The Generality of Parietal Involvement in Visual Attention
The General Linear Model (GLM)
Adaptive multi-voxel representation of stimuli, rules and responses
Contour Saliency in Primary Visual Cortex
Multiple Timescales of Memory in Lateral Habenula and Dopamine Neurons
Human Orbitofrontal Cortex Represents a Cognitive Map of State Space
Psych 231: Research Methods in Psychology
Experiment Basics: Designs
The General Linear Model
Experimental Evaluation
Christian Büchel, Jond Morris, Raymond J Dolan, Karl J Friston  Neuron 
Experiment Basics: Variables
Vahe Poghosyan, Andreas A. Ioannides  Neuron 
Psych 231: Research Methods in Psychology
Probabilistic Modelling of Brain Imaging Data
The General Linear Model
The General Linear Model
DESIGN OF EXPERIMENTS by R. C. Baker
Encoding of Stimulus Probability in Macaque Inferior Temporal Cortex
Basics of fMRI and fMRI experiment design
Caroline A. Montojo, Susan M. Courtney  Neuron 
Nori Jacoby, Josh H. McDermott  Current Biology 
Presentation transcript:

Advances in Event-Related fMRI Design Douglas N. Greve

Outline What is Event-Related Design? Blocked Design Fixed-Interval Event-Related Rapid-Presentation (Jittered) Event-Related Efficiency and Event Scheduling Blocked Design gives context for ER. RP-ER brings problem of scheduling.

Fact of (fMRI) Life #1: Dispersion Not like EEG/MEG where response is finished after a few hundred ms. How closely can trials/events be placed and still be able to differentiate their responses? This data is the average of 212 responses. How closely can trials/events be spaced?

Fact of (fMRI) Life #2: Noise Ultimately, noise is the rate limiting factor. The further away from baseline, the easier it is to detect the response. These are stddev bars. Error bars will shrink as more data are collected. To detect a response, need to (1) create a bigger signal, and/or (2) collect many trials. Down side to many trials: (1) cost, (2) wear and tear on subjects, (3) need all that stimuli. How much data needs to be collected?

Fact of (fMRI) Life #3: Time Collect lots of observations to reduce noise Time is Money Subjects won’t work forever Stimuli – famous faces, non-words, syntactically anomalous sentences.

Blocked Design Consecutive, rapid presentation for long duration. fixation Consecutive, rapid presentation for long duration. Use overlap to build a larger signal. Simple analysis. Optimal for detection. Each color represents a different type of stimulus. May be a stimulus or task of long duration instead of multiple rapid presentations. Example of stimulus types: global/local, novel/repeated, happy/sad faces. Assumption: invariant asymptotic. Use long dispersion to create overlap and generate a larger signal.

Using Overlap to Increase Amplitude The effect of rapid presentation on the amplitude of the response. Don’t get 3 times the amplitude with 3 trials. The greater the amplitude, the more it stands out from the noise. 1 2 3

Blocked Design Drawbacks Lose ability to distinguish individual responses Confounding psychological and physiological effects Habituation/Adaptation Expectation Set (Strategy) Experimenter may be trying to measure set. Highly constrained design. Not good for Multi-modal. Little info about hemodynamics. Habituation – that face AGAIN. Expectation/Anticipation. Reminder: efficient.

What is Event-Related Design? (c.f. Blocked Design) Measure Average Response to Single Event Type Post Hoc Event Assignment based on Subject’s Response Random Order of Events Historical: EEG/Evoked Potentials Less Powerful than Blocked Already described an event in first slide. Single trial.

Fixed-Interval Event-Related 12-20s Push trials apart enough to prevent overlap. Interval fixed at minimum is most efficient. Random Sequence (Counter-balanced) Allows Post-Hoc Stimulus Definition Mitigates Habituation, Expectation (?), and Set Inflexible/Inefficient/Boring Good if limited by number of stimuli (not scanning time) Blue bar is length of typical block from blocked design. Raw signal still interpretable. Assumption: time-invariant response. Not very many presentations. Most efficient without overlap is fixed at minimum time needed to prevent overlap.

Rapid-Presentation Event-Related Closely Spaced Trials (Overlap!) Raw signal uninterpretable More Stimulus Presentations for given scanning interval Random Sequence Jitter = “Random” Inter-Stimulus Interval (ISI/SOA) It is possible to present stimuli so close to each other that they overlap and still distinguish between responses. Must observe all levels of overlap. Raw signal uninterpretable. ISI/SOA is a randomly chosen multiple of the TR.

Where does jitter come from? (What’s a Null Condition?) “Null” condition – fixation cross or dot By hypothesis, no response to null Insert random amounts of null between task conditions Differential ISI = Differential Overlap A + B A + A B A + + B + B A The null condition is not a condition. Differential overlap and gender/handedness. Conditions A and B with fixation (+). Yellow bars indicate the ISI between A trials. Red bars indicate ISI between B trials. Green bars indicate ISI from A to B. Differential overlap can come from non-adjacent presentations. Zero ISI. No bars between null and A or B because null is not a condition. Time

Rapid-Presentation Properties Efficient (not as efficient as blocked) Can distinguish responses despite overlap Highly resistant to habituation, set, and expectation Flexible timing (Behavioral, EEG, MEG) Linear overlap assumption Analysis: Selective Averaging/Deconvolution (GLM) How to schedule stimulus onsets?

Scheduling and Efficiency B: N=10 C: N=10 Efficiency: statistical power/SNR/CNR per acquisition Efficiency increases with N Efficiency decreases with overlap Efficiency increases with differential overlap Choose schedule with optimum efficiency before scanning Three designs: A, B, and C all within a fixed scanning interval. A has no overlap but only N=5. B has N=10 but no differential overlap. C has N=10 and differential overlap. Larger the N, the lower the ISI. Differential overlap: cf gender/handedness test.

Summary Facts of Life: Dispersion, Noise, Time Blocked - Habituation, Expectation, Set, No Post-Hoc Fixed-Interval Event-Related – Inefficient/Boring Rapid-Presentation Event-Related Randomized inter-stimulus onsets Overlap Linearity Efficient - Optimization Tool Identical designs for Behavioral, fMRI, EEG, and MEG Blocked uses dispersion to create a bigger signal at the cost of distinguishing individual responses (and hab, exp, and set).