Principal Component Analysis (PCA)

Slides:



Advertisements
Similar presentations
Component Analysis (Review)
Advertisements

Principal Component Analysis Based on L1-Norm Maximization Nojun Kwak IEEE Transactions on Pattern Analysis and Machine Intelligence, 2008.
Machine Learning Lecture 8 Data Processing and Representation
1er. Escuela Red ProTIC - Tandil, de Abril, 2006 Principal component analysis (PCA) is a technique that is useful for the compression and classification.
A Comprehensive Study on Third Order Statistical Features for Image Splicing Detection Xudong Zhao, Shilin Wang, Shenghong Li and Jianhua Li Shanghai Jiao.
Principal Component Analysis CMPUT 466/551 Nilanjan Ray.
Principal Component Analysis
Principal Component Analysis
3D Geometry for Computer Graphics
L15:Microarray analysis (Classification) The Biological Problem Two conditions that need to be differentiated, (Have different treatments). EX: ALL (Acute.
Face Recognition using PCA (Eigenfaces) and LDA (Fisherfaces)
The Terms that You Have to Know! Basis, Linear independent, Orthogonal Column space, Row space, Rank Linear combination Linear transformation Inner product.
CSE 300: Software Reliability Engineering Topics covered: Software metrics and software reliability.
3D Geometry for Computer Graphics
INTRODUCTION TO Machine Learning ETHEM ALPAYDIN © The MIT Press, Lecture Slides for.
CS 485/685 Computer Vision Face Recognition Using Principal Components Analysis (PCA) M. Turk, A. Pentland, "Eigenfaces for Recognition", Journal of Cognitive.
Summarized by Soo-Jin Kim
Principle Component Analysis Presented by: Sabbir Ahmed Roll: FH-227.
Linear Least Squares Approximation. 2 Definition (point set case) Given a point set x 1, x 2, …, x n  R d, linear least squares fitting amounts to find.
Machine Learning CS 165B Spring Course outline Introduction (Ch. 1) Concept learning (Ch. 2) Decision trees (Ch. 3) Ensemble learning Neural Networks.
Dimensionality Reduction: Principal Components Analysis Optional Reading: Smith, A Tutorial on Principal Components Analysis (linked to class webpage)
Chapter 2 Dimensionality Reduction. Linear Methods
Presented By Wanchen Lu 2/25/2013
Feature extraction 1.Introduction 2.T-test 3.Signal Noise Ratio (SNR) 4.Linear Correlation Coefficient (LCC) 5.Principle component analysis (PCA) 6.Linear.
General Tensor Discriminant Analysis and Gabor Features for Gait Recognition by D. Tao, X. Li, and J. Maybank, TPAMI 2007 Presented by Iulian Pruteanu.
Generalizing Linear Discriminant Analysis. Linear Discriminant Analysis Objective -Project a feature space (a dataset n-dimensional samples) onto a smaller.
Chapter 7 Multivariate techniques with text Parallel embedded system design lab 이청용.
CSE 185 Introduction to Computer Vision Face Recognition.
Discriminant Analysis
Reduces time complexity: Less computation Reduces space complexity: Less parameters Simpler models are more robust on small datasets More interpretable;
EIGENSYSTEMS, SVD, PCA Big Data Seminar, Dedi Gadot, December 14 th, 2014.
PCA vs ICA vs LDA. How to represent images? Why representation methods are needed?? –Curse of dimensionality – width x height x channels –Noise reduction.
MACHINE LEARNING 7. Dimensionality Reduction. Dimensionality of input Based on E Alpaydın 2004 Introduction to Machine Learning © The MIT Press (V1.1)
Principal Component Analysis Zelin Jia Shengbin Lin 10/20/2015.
Principal Component Analysis and Linear Discriminant Analysis for Feature Reduction Jieping Ye Department of Computer Science and Engineering Arizona State.
Feature Extraction 主講人:虞台文. Content Principal Component Analysis (PCA) PCA Calculation — for Fewer-Sample Case Factor Analysis Fisher’s Linear Discriminant.
2D-LDA: A statistical linear discriminant analysis for image matrix
LDA (Linear Discriminant Analysis) ShaLi. Limitation of PCA The direction of maximum variance is not always good for classification.
Feature Extraction 主講人:虞台文.
Presented by: Muhammad Wasif Laeeq (BSIT07-1) Muhammad Aatif Aneeq (BSIT07-15) Shah Rukh (BSIT07-22) Mudasir Abbas (BSIT07-34) Ahmad Mushtaq (BSIT07-45)
Face detection and recognition Many slides adapted from K. Grauman and D. Lowe.
Principal Components Analysis ( PCA)
Multivariate statistical methods. Multivariate methods multivariate dataset – group of n objects, m variables (as a rule n>m, if possible). confirmation.
Part 3: Estimation of Parameters. Estimation of Parameters Most of the time, we have random samples but not the densities given. If the parametric form.
Machine Learning Supervised Learning Classification and Regression K-Nearest Neighbor Classification Fisher’s Criteria & Linear Discriminant Analysis Perceptron:
Introduction to Vectors and Matrices
PREDICT 422: Practical Machine Learning
Background on Classification
School of Computer Science & Engineering
LECTURE 10: DISCRIMINANT ANALYSIS
9.3 Filtered delay embeddings
Recognition with Expression Variations
Principal Component Analysis (PCA)
Machine Learning Dimensionality Reduction
Roberto Battiti, Mauro Brunato
Principal Component Analysis
PCA vs ICA vs LDA.
Principal Component Analysis
PCA is “an orthogonal linear transformation that transfers the data to a new coordinate system such that the greatest variance by any projection of the.
Introduction PCA (Principal Component Analysis) Characteristics:
Pattern Classification All materials in these slides were taken from Pattern Classification (2nd ed) by R. O. Duda, P. E. Hart and D. G. Stork, John.
Dimensionality Reduction
Feature space tansformation methods
Generally Discriminant Analysis
LECTURE 09: DISCRIMINANT ANALYSIS
Introduction to Vectors and Matrices
Feature Selection Methods
Principal Component Analysis
INTRODUCTION TO Machine Learning
Unsupervised Learning
Presentation transcript:

Principal Component Analysis (PCA)

Introduction Principal component analysis (PCA) is a standard tool in modern data analysis - in diverse fields from neuroscience to computer graphics. It is very useful method for extracting relevant information from confusing data sets.

Definition Principal component analysis (PCA) is a statistical procedure that uses an orthogonal transformation to convert a set of observations of possibly correlated variables into a set of values of linearly uncorrelated variables called principal components. The number of principal components is less than or equal to the number of original variables.

Goals The main goal of a PCA analysis is to identify patterns in data PCA aims to detect the correlation between variables. It attempts to reduce the dimensionality.

Dimensionality Reduction It reduces the dimensions of a d-dimensional dataset by projecting it onto a (k)-dimensional subspace (where k<d) in order to increase the computational efficiency while retaining most of the information.

Transformation This transformation is defined in such a way that the first principal component has the largest possible variance and each succeeding component in turn has the next highest possible variance.

PCA Approach Standardize the data. Perform Singular Vector Decomposition to get the Eigenvectors and Eigenvalues. Sort eigenvalues in descending order and choose the k- eigenvectors Construct the projection matrix from the selected k- eigenvectors. Transform the original dataset via projection matrix   to obtain a k-dimensional feature subspace.

Limitation of PCA The results of PCA depend on the scaling of the variables. A scale-invariant form of PCA has been developed.

Applications of PCA : Interest Rate Derivatives Portfolios   Interest Rate Derivatives Portfolios Neuroscience

Linear Discriminant Analysis (LDA)

Introduction Linear Discriminant Analysis (LDA) is used to solve dimensionality reduction for data with higher attributes Pre-processing step for pattern-classification and machine learning applications. Used for feature extraction. Linear transformation that maximize the separation between multiple classes. “Supervised” - Prediction agent

Feature Subspace : Feature space data is well represented?   To reduce the dimensions of a d-dimensional data set by projecting it onto a (k)-dimensional subspace (where k < d) Feature space data is well represented? Compute eigen vectors from dataset Collect them in scatter matrix Generate k-dimensional data from d-dimensional dataset.

Scatter Matrix: Within class scatter matrix In between class scatter matrix Maximize the between class measure & minimize the within class measure.

LDA steps: Compute the d-dimensional mean vectors. Compute the scatter matrices Compute the eigenvectors and corresponding eigenvalues for the scatter matrices. Sort the eigenvalues and choose those with the largest eigenvalues to form a d×k dimensional matrix  Transform the samples onto the new subspace.

Dataset Attributes : X O Blank Class: Positive(Win for X) Negative(Win for O)

Dataset top-left-square top-middle-square top-right-square middle-left-square middle-middle-square middle-right-square bottom-left-square bottom-middle-square bottom-right-square Class x o positive b negative

References: [1]https://en.wikipedia.org/wiki/Principal_component_analysis# [2]http://sebastianraschka.com/Articles/2015_pca_in_3_steps.html#a-summary-of-the-pca-approach [3]http://cs.fit.edu/~dmitra/ArtInt/ProjectPapers/PcaTutorial.pdf [4] Sebastian Raschka, Linear Discriminant Analysis Bit by Bit, http://sebastianraschka.com/Articles/414_python_lda.html , 414. [5] Zhihua Qiao, Lan Zhou and Jianhua Z. Huang, Effective Linear Discriminant Analysis for High Dimensional, Low Sample Size Data [6] Tic Tac Toe Dataset - https://archive.ics.uci.edu/ml/datasets/Tic-Tac-Toe+Endgame