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Immunology Ontology Workshop Buffalo, NY June 11-13, 2012.

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Presentation on theme: "Immunology Ontology Workshop Buffalo, NY June 11-13, 2012."— Presentation transcript:

1 Immunology Ontology Workshop Buffalo, NY June 11-13, 2012

2 http://www.bioontology.org/wiki

3 Ontologies GO-IP Gene Ontology – Immunological Process CL Cell Ontology immune branches PRO Protein Ontology OGMS Ontology for General Medical Science OBIOntology for Biomedical Investigations IO Immunology Ontology IDO Infectious Disease Ontology VOVaccine Ontology AO Allergy Ontology IEO Immune Epitope Ontology ND Neurological Disease Ontology – Autoimmune

4 Open Biomedical Ontologies Foundry (obofoundry.org)

5 Day 1 Reactome Knowledgebase of biological pathways GO-IP IO Immunology Ontology AO Allergy Ontology IDO Infectious Disease Ontology Core IDO Staph Aureus IDO Malaria IDO Brucellosis VOVaccine Ontology

6 OGMS – Ontology for General Medical Science 6

7 Day 2 Ontologies and Flow Cytometry Informatics Driving Biological Project Define cell types in CL in terms of surface proteins using relations to terms of the Protein Ontology

8 Day 3 OBI Ontology for Biomedical Investigations Representation of immunology experiments IEDB Immune Epitope Database ND Auto-Immune Disease Ontology Clinical Ontologies Working session on OGMS

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