3. Engineering algae (or plants) to make H 2

4. Changing Cyanobacteria to make a 5 carbon alcohol

5. Photosynthesis Converts light to chemical energy 6 CO 2 + 6 H 2 O + light energy C 6 H 12 O 6 + 6 O 2

6. Photosynthesis 2 sets of rxns in separate parts of chloroplast

7. Photosynthesis 1) Light rxns use light to pump H + use ∆ pH to make ATP by chemiosmosis

8. Photosynthesis 1) Light rxns use light to pump H + use ∆ pH to make ATP by chemiosmosis 2) Light-independent (dark) rxns use ATP & NADPH from light rxns to make organics

9. Photosynthesis 1) Light rxns use light to pump H + use ∆ pH to make ATP by chemiosmosis 2) Light-independent (dark) rxns use ATP & NADPH from light rxns to make organics only link: each provides substrates needed by the other

10. Light Rxns 3 stages 1) Catching a photon (primary photoevent)

11. Light Rxns 3 stages 1) Catching a photon (primary photoevent) 2) ETS

12. Light Rxns 3 stages 1) Catching a photon (primary photoevent) 2) ETS 3) ATP synthesis by chemiosmosis

13. Catching photons photons: particles of energy that travel as waves Energy inversely proportional to wavelength ( ) visible light ranges from 400 -700 nm

14. Catching photons Photons: particles of energy that travel as waves caught by pigments: molecules that absorb light

15. Pigments Can only absorb certain photons

16. Pigments Can only absorb certain photons Photon has exact energy to push an e- to an outer orbital

17. Pigments Can only absorb certain photons Photon has exact energy to push an e- to an outer orbital from ground to excited state

18. Pigments Photon has exact energy to push an e- to an outer orbital from ground to excited state each pigment has an absorption spectrum: it can absorb

19. Pigments Chlorophyll a is most abundant pigment chlorophyll a looks green -> absorbs all but green Reflects green

20. Accessory Pigments absorb which chlorophyll a misses chlorophyll b is an important accessory pigment

21. Accessory Pigments absorb which chlorophyll a misses chlorophyll b is an important accessory pigment others include xanthophylls & carotenoids

22. Accessory Pigments action spectrum shows use of accessory pigments used for photosynthesis

23. Accessory Pigments action spectrum shows use of accessory pigments used for photosynthesis plants use entire visible spectrum absorbed by chlorophyll work best

24. Light Reactions 1) Primary photoevent: pigment absorbs a photon

25. Light Reactions 1) Primary photoevent: pigment absorbs a photon e - is excited -> moves to outer orbital

26. Light Reactions 4 fates for excited e-: 1) returns to ground state emitting heat & longer light = fluorescence

27. Light Reactions 4 fates for excited e - : 1) fluorescence 2) transfer to another molecule

28. Light Reactions 4 fates for excited e - : 1) fluorescence 2) transfer to another molecule 3) Returns to ground state dumping energy as heat

29. 4 fates for excited e - : 1) fluorescence 2) transfer to another molecule 3) Returns to ground state dumping energy as heat 4) energy is transferred by inductive resonance excited e - vibrates and induces adjacent e - to vibrate at same frequency

30. 4 fates for excited e - : 4) energy is transferred by inductive resonance excited e - vibrates and induces adjacent e - to vibrate at same frequency Only energy is transferred

31. 4 fates for excited e - : 4) energy is transferred by inductive resonance excited e - vibrates and induces adjacent e - to vibrate at same frequency Only energy is transferred e - returns to ground state

32. Photosystems Pigments are bound to proteins arranged in thylakoids in photosystems arrays that channel energy absorbed by any pigment to rxn center chlorophylls

33. Photosystems Pigments are bound to proteins arranged in thylakoids in photosystems arrays that channel energy absorbed by any pigment to rxn center chls Need 2500 chlorophyll to make 1 O 2

34. Photosystems Arrays that channel energy absorbed by any pigment to rxn center chls 2 photosystems : PSI & PSII PSI rxn center chl a dimer absorbs 700 nm = P700

35. Photosystems Arrays that channel energy absorbed by any pigment to rxn center chls 2 photosystems : PSI & PSII PSI rxn center chl a dimer absorbs 700 nm = P700 PSII rxn center chl a dimer absorbs 680 nm = P680

36. Photosystems Each may have associated LHC (light harvesting complex) (LHC can diffuse within membrane) PSI has LHCI: ~100 chl a, a few chl b & carotenoids

37. Photosystems Each may have associated LHC (light harvesting complex) (LHC can diffuse within membrane) PSI has LHCI: ~100 chl a, a few chl b & carotenoids PSII has LHCII: ~250 chl a, many chl b & carotenoids Proteins of LHCI & LHCII also differ

38. Photosystems PSI performs cyclic photophosphorylation Absorbs photon & transfers energy to P700

39. cyclic photophosphorylation Absorbs photon & transfers energy to P700 transfers excited e - from P700 to fd

40. cyclic photophosphorylation Absorbs photon & transfers energy to P700 transfers excited e - from P700 to fd fd returns e - to P700 via PQ, cyt b 6 /f & PC

41. cyclic photophosphorylation Absorbs photon & transfers energy to P700 transfers excited e - from P700 to fd fd returns e - to P700 via PQ, cyt b 6 /f & PC Cyt b 6 /f pumps H +

42. Cyclic Photophosphorylation Transfers excited e - from P700 to fd Fd returns e - to P700 via cyt b 6 -f & PC Cyt b 6 -f pumps H + Use PMF to make ATP

43. Cyclic photophosphorylation first step is from P700 to A 0 (another chlorophyll a) charge separation prevents e - from returning to ground state = true photoreaction

44. Cyclic photophosphorylation first step is from P700 to A 0 (another chlorophyll a) next transfer e - to A 1 (a phylloquinone) next = 3 Fe/S proteins

45. Cyclic photophosphorylation first step is from P700 to A 0 (another chlorophyll a) next transfer e - to A 1 (a phylloquinone) next = 3 Fe/S proteins finally ferredoxin

46. Cyclic photophosphorylation 1)Ferredoxin = branchpoint: in cyclic PS FD reduces PQ

47. Cyclic photophosphorylation 1)Ferredoxin reduces PQ 2)PQH 2 diffuses to cyt b 6 /f 2) PQH2 reduces cyt b 6 and Fe/S, releases H + in lumen since H + came from stroma, transports 2 H + across membrane (Q cycle)

48. Cyclic photophosphorylation 3) Fe/S reduces plastocyanin via cyt f cyt b 6 reduces PQ to form PQ -

49. Cyclic photophosphorylation 4) repeat process, Fe/S reduces plastocyanin via cyt f cyt b 6 reduces PQ - to form PQH2

50. Cyclic photophosphorylation 4) repeat process, Fe/S reduces plastocyanin via cyt f cyt b 6 reduces PQ - to form PQH2 Pump 4H+ from stroma to lumen at each cycle (per net PQH2)

51. Cyclic photophosphorylation 5) PC (Cu + ) diffuses to PSI, where it reduces an oxidized P700

52. Cyclic photophosphorylation energetics: light adds its energy to e - -> excited state Eo' P700 = +0.48 V Eo' P700 * = -1.3 V

53. Cyclic photophosphorylation energetics: light adds its energy to e - -> excited state Eo' P700 = +0.48 V Eo' P700 * = -1.3 V Eo' fd = - 0.42 V

54. Cyclic photophosphorylation energetics: light adds its energy to e - -> excited state Eo' P700 = +0.48 V Eo' P700 * = -1.3 V Eo' fd = - 0.42 V Eo' cyt b 6 /f = +0.3V

55. Cyclic photophosphorylation energetics: light adds its energy to e - -> excited state Eo' P700 = +0.48 V Eo' P700 * = -1.3 V Eo' fd = - 0.42 V Eo' cyt b 6 /f = +0.3V Eo' PC = +0.36V

56. Cyclic photophosphorylation energetics: light adds its energy to e - -> excited state Eo' P700 = +0.48 V Eo' P700 * = -1.3 V Eo' fd = - 0.42 V Eo' cyt b 6 /f = +0.3V Eo' PC = +0.36V e - left in excited state returns in ground state

57. Cyclic photophosphorylation e - left in excited state returns in ground state Energy pumped H +

58. Cyclic photophosphorylation Limitations Only makes ATP

59. Cyclic photophosphorylation Limitations Only makes ATP Does not supply electrons for biosynthesis = no reducing power

60. Photosystems PSI performs cyclic photophosphorylation Makes ATP but not NADPH: exact mech for PQ reduction unclear, but PQ pumps H+

61. Photosystem II Evolved to provide reducing power -> added to PSI

62. Photosystem II Evolved to provide reducing power Added to PSI rxn center absorbs 680 nm (cf 700 nm)

63. Photosystem II rxn center absorbs 680 nm (cf 700 nm) can oxidize H 2 O redox potential of P680 + is + 1.1 V (cf + 0.82 V for H 2 O)

64. Photosystem II rxn center absorbs 680 nm (cf 700 nm) can oxidize H 2 O redox potential of P680 + is + 1.1 V (cf + 0.82 V for H 2 O) Use e - from H 2 O to reduce NADP+ (the e - carrier used for catabolic reactions)

65. Photosystem II rxn center absorbs 680 nm (cf 700 nm) can oxidize H 2 O redox potential of P680 + is + 1.1 V (cf + 0.82 V for H 2 O) Use e - from H 2 O to reduce NADP+ (the e - carrier used for catabolic reactions) use NADPH c.f. NADH to prevent cross- contaminating catabolic & anabolic pathways

66. PSI and PSII work together in the “Z-scheme” - a.k.a. “non-cyclic photophosphorylation” General idea: ∆ redox potential from H 2 O to NADP + is so great that must boost energy of H 2 O e - in 2 steps

67. PSI and PSII work together in the “Z-scheme” General idea: ∆ redox potential from H 2 O to NADP + is so great that must boost energy of H 2 O e - in 2 steps each step uses a photon

68. PSI and PSII work together in the “Z-scheme” General idea: ∆ redox potential from H 2 O to NADP + is so great that must boost energy of H 2 O e - in 2 steps each step uses a photon 2 steps = 2 photosystems

69. PSI and PSII work together in the “Z-scheme” 1) PSI reduces NADP +

70. PSI and PSII work together in the “Z-scheme” 1) PSI reduces NADP + e - are replaced by PSII

71. PSI and PSII work together in the “Z-scheme” 2) PSII gives excited e - to ETS ending at PSI

72. PSI and PSII work together in the “Z-scheme” 2) PSII gives excited e - to ETS ending at PSI Each e - drives cyt b 6 /f

73. PSI and PSII work together in the “Z-scheme” 2) PSII gives excited e - to ETS ending at PSI Each e - drives cyt b 6 /f Use PMF to make ATP