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Network Workbench A Workbench for Network Scientists Download at

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1 Network Workbench A Workbench for Network Scientists Download at http://nwb.slis.indiana.edu

2 Goal:Develop a large-scale network analysis, modeling and visualization toolkit for physics, biomedical, and social science research. Amount: $1,120,926, NSF IIS-0513650 award Duration:Sept. 2005 - Aug. 2008 Website:http://nwb.slis.indiana.eduhttp://nwb.slis.indiana.edu

3 Katy Börner Albert-Laszlo Barabasi Santiago Schnell Investigators Alessandro Vespignani Stanley Wasserman Eric Wernert

4 Software Team Weixia (Bonnie) Huang, lead Bruce Herr Russell Duhon Tim Kelley Micah Linnemeier Heng Zhang Duygu Balkan Ann McCranie

5 Advisory Board James Hendler Jason Leigh Neo Martinez Michael Macy Ulrik Brandes Mark Gerstein Stephen North Tom Snijders Noshir Contractor

6 A Quick Overview of Research What is the NWB Tool? Using the NWB Tool for Scientometrics Using the NWB Tool for Discrete Network Dynamics Built using CIShell Outline

7 A Quick Overview of Research Social Science, Scientometrics, Economics, Proteomics, and Epidemiology

8 Social Science Studying large scale social networks such as Wikipedia. Viszards 2007 Entry Second Sight: An Emergent Mosaic of Wikipedian Activity The New Scientist, May 19, 2007

9 113 Years of Physical Review Citation Patterns Across the History of Physics

10 Scientometrics Studying science by scientific means.

11 Proteomics Protein-Protein Interactions

12 Economics Does the Type of Product that a Country Exports Matter for Subsequent Economic Performance?

13 Epidemiology Forecasting (and preventing the effects of) the next pandemic.

14 What is the NWB Tool? A network analysis, modeling, and visualization toolkit for physics, biomedical, and social science Research

15 But first, Why is the NWB Tool?

16 Data Different Formats Different Models Algorithms Different Purposes Different Implementations Different Programming Languages Different Communities with Different Practices Different Tools

17 So, the NWB Tool can work with...

18 Data Different Formats Different Models Algorithms Different Purposes Different Implementations Different Programming Languages Different Communities with Different Practices Different Tools

19 GraphML XGMML Pajek.net Pajek.mat NWB TreeML File Formats Edgelist CSV ISI

20 Prefuse Alpha Prefuse Beta JUNG Java Object ‘Formats’

21 We Do It Like This

22 A Few Features Windows, Linux, OS X Write algorithms in Fortran, Java, C++, Jython, or something else Many algorithms work with large networks Integrates the excellent GUESS visualization tool Automatic data conversion Integrated 2D plotting via Gnuplot

23 Using the NWB Tool for Scientometrics Co-Authorship, Burst Detection, Et Cetera

24 Go From Here

25 To Here

26 In a few minutes. In a general way.

27 Using the NWB Tool for Discrete Network Dynamics

28 Built Using CIShell A General Framework For Integrating Algorithms and Data

29 Algorithms are Simple

30 No Networks There...

31 No networks means moving among data representations is easy.

32 Thank you. NSF IIS-0513650 award

33 http://nwb.slis.indiana.edu http://cishell.org


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