1. The iPlant Collaborative Using iPlant for sharing, managing, and analyzing ecological data Ramona Walls Presented at ESA 2014 – Ignite session August 12, 2014 Sacramento, CA

2. iPlant: It’s not just for plants!

3. What is Cyberinfrastructure? Cyberinfrastructure (CI) is… data storage software high-performance computing people

4. What is Cyberinfrastructure? Cyberinfrastructure (CI) is… data storage software high-performance computing people used to solve problems of size and scope that would not otherwise be solvable.

5. The iPlant Collaborative Vision Enable life science researchers and educators to use and extend cyberinfrastructure to understand and ultimately predict the complexity of biological systems.

6. iPlant is a collaborative virtual organization

7. Who does iPlant collaborate with? …and more

8. iPlant tools and services support the Life Cycle of Data Store Markup Search Transfer Analyze Visualize Collaborate Share Data Results A Results B Algo1 Algo2 Pre- Publication Post- Publication

9. iPlant Tools and Services - a whirlwind tour image credit: http://mdtartist83.deviantart.com/art/Whirlwind-437859773

10. iPlant Tools and Services Data Store: storage, sharing, publishing

11. iPlant Tools and Services Data Store: storage, sharing, publishing Fast data transfers Multiple access modes Fine-grained permissions

12. iPlant Tools and Services Atmosphere: free and easy cloud computing

13. iPlant Tools and Services Discovery Environment: web interface for HPC

14. iPlant Tools and Services Discovery Environment: high performance computing – no command line needed! Manage data upload/download add metadata, comments, tags share data with other users or the public Run analyses and workflows choose from hundreds of apps or create your own

15. iPlant Tools and Services Agave API: science-as-a-service platform

16. iPlant Tools and Services Bisque: image management and analysis

17. iPlant Tools and Services Taxonomic Name Resolution Service for plants

18. How to interact with iPlant Powered by iPlant Extended Collaborative Support http://www.iplantcollaborative.org/about- iplant/science/science-support Or just do your own thing with our infrastructure!

19. Want more information? http://www.iplantcollaborative.org rwalls@iplantcollaborative.org

20. Talk #48225: “iPlant Cyberinfrastructure enables large- scale and big-data ecological research” COS: Ecoinformatics Friday, August 15, 2014 8:00 AM - 11:30 AM Regency Ballroom A