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© NIH National Center for Image-Guided Therapy, November, 2008 System Set-up for the Integration of BrainLab, BioImage Suite and Slicer3 Haiying Liu Surgical.

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Presentation on theme: "© NIH National Center for Image-Guided Therapy, November, 2008 System Set-up for the Integration of BrainLab, BioImage Suite and Slicer3 Haiying Liu Surgical."— Presentation transcript:

1 © NIH National Center for Image-Guided Therapy, November, 2008 System Set-up for the Integration of BrainLab, BioImage Suite and Slicer3 Haiying Liu Surgical Planning Lab Brigham & Women's Hospital Harvard Medical School

2 © NIH National Center for Image-Guided Therapy, November, 2008 Acknowledgements National Center for Image Guided Therapy NIH U41RR NEDO Intelligent Surgical Instruments Project Xenios Papademetris Yale University School of Medicine Pratik Patel BrainLAB, Inc.

3 © NIH National Center for Image-Guided Therapy, November, 2008 Outline Overview of the system Configure BrainLab Configure BioImage Suite Connect BioImage Suite to BrianLab Connect BioImage Suite to Slicer3

4 © NIH National Center for Image-Guided Therapy, November, 2008 Overview BioImage Suite BrainLab Slicer3 VVLink OpenIGTLink Slicer3 communicates with BrainLab through BioImage Suite. BrainLab sends tracking data and images to BioImage Suite on VVLink. BioImage Suite relays the data to Slicer3 on OpenIGTLink.

5 © NIH National Center for Image-Guided Therapy, November, 2008 Configure BrianLab Power on your BrainLab system. On BrainLab interface (see next slide), get to Tools->VV Link. Activate VV Link by clicking the button in the middle. This may need a license. Write down the password in the red oval. The password may be changed if BrainLab plugs in a different Ethernet jacket.

6 © NIH National Center for Image-Guided Therapy, November, 2008 Configure BrianLab (From Xenophon Papademetris, Yale University) Left click this button to activate VVLink Save this password for later use

7 © NIH National Center for Image-Guided Therapy, November, 2008 Configure BioImage Suite Left click to bring Preferences Widget up (next slide)

8 © NIH National Center for Image-Guided Therapy, November, 2008 Configure BioImage Suite 1. Enable OpenIGTLink and VectorVisionLink 2. Left click to save Preferences 3. Left click to close and then exit BrainLab

9 © NIH National Center for Image-Guided Therapy, November, 2008 Configure BioImage Suite Start BioImage Suite again. Check and make sure both OpenIGTLink and VectorVisionLink are enabled.

10 © NIH National Center for Image-Guided Therapy, November, 2008 Connect BioImage Suite to BrianLab 1. Left click the Neurosurgery button 2. Left click to bring the VVLink/OpenIGTLink widget

11 © NIH National Center for Image-Guided Therapy, November, 2008 Connect BioImage Suite to BrianLab Left click to bring up the VVLink Tool widget

12 © NIH National Center for Image-Guided Therapy, November, 2008 Connect BioImage Suite to BrianLab 1. Left click to a new server (BrainLab system) 2. Input the IP address of the BrainLab system 4. Left click to add server 3. Input the password saved before

13 © NIH National Center for Image-Guided Therapy, November, 2008 Connect BioImage Suite to BrianLab 1. The added server should be listed here. Make it visible 2. Left click to connect 3. If the connection succeeds, on both sides, you will see a confirmation message. Click OK button to confirm.

14 © NIH National Center for Image-Guided Therapy, November, 2008 Connect BioImage Suite to Slicer3 Choose OpenIGTLink IF module

15 © NIH National Center for Image-Guided Therapy, November, 2008 Connect BioImage Suite to Slicer3 1. Left click to add a new connector 2. Check it as server 3. Check it as active

16 © NIH National Center for Image-Guided Therapy, November, 2008 Connect BioImage Suite to Slicer3 1. Input the server (Slicer3) name or its IP address and port number 2. Left click to connect 3. Confirmation message after pressing Connect button


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