Presentation on theme: "CTS. Common Terminology Services Overview Technology Status."— Presentation transcript:
Common Terminology Services Overview Technology Status
CTS Overview Goal Create interface specification which allows software based on the HL7 version 3 RIM to access terminology content in an consistent and implementation independent fashion.
CTS Overview Benefits for HL7 designers and implementation developers –Software can be written once and wont need to understand each terminology vendors database and/or API –Hides much of the complexity inherent in modern terminology systems.
CTS Overview Benefits for terminology and terminology software developers –Basic functional requirements clearly specified –Implementation can be based on existing databases and software –A common entry point – you dont have to sell the idea – you sell your enhancements, performance, etc.
CTS Partitions Message API vs. Terminology API vs. Mapping API HL7 Software Implementation Message Layer Terminology API Terminology Layer
CTS Overview Message API vs. Terminology API HL7 Software Implementation Message API Terminology API Is this code valid for this attribute? Is this code an example of an orderable drug? What are the valid codes for this attribute? What is the preferred English designation for this code? What is the closest equivalent for code x in terminology y?
CTS Partitions Message API vs. Terminology API vs. Mapping API HL7 Software Implementation Message Layer Terminology API Terminology Layer API published primarily for client implementations API published primarily for server implementations
CTS Partitions Runtime vs. Browsing (vs. Authoring) –Runtime Profile High availability, high throughput Production line use –Browsing Profile High functionality – search, filter, organize Use case is modeling and concept discovery Availability and throughput requirements (potentially) less stringent –Authoring Profile Needed to enter and modify HL7 vocabulary content May not need to be official standard
CTS Partitions Message API Vocabulary API Mapping API Runtime xx x Browsing xx Authoring x(limited/ HL7 Specific)
CTS API Subparts CTS Message API –Browser –Runtime CTS Vocabulary API –Browser –Runtime –Mapper (not really vocab, but it fits well here…) –Maintenance (lightweight authoring)
CTS Message Runtime API 1.Is this code* valid for this vocabulary domain and context(s)? 2.Is this a valid translation for this code for this vocabulary domain and context(s)? 3.Translate this code from this vocabulary domain into a code that is meaningful in this context. 4.Fill out the missing details (display name, code system name, version) for this code (for the supplied language and context(s)) * Instance of a CD data type
ValidateCode 1.Should this validation process include modifier validation, or should there be a separate function for modifiers? 2.Translations - if the code has translations, it is possible that the base code cannot be validated and that valid code(s), if any are in tre translation section only. What should the approach be under these circumstances? 3.Should there be a batch equivalent of this function, taking in multiple codes, outputing multiple details?
Validate Translation 1.How does this function relate to ValidateCode? 2.Should a complete translation list be checked? 3.What should the behavior be regarding recursive translations? 4.Batching?
TranslateCode 1.What unqiuely determines the target of a translation? If Value Sets can correspond to multiple code systems, then what should the target identifier be? The value set id? 2.What to do when a translation doesn't exist. Options include raise an exception (the current approach), emit an exception type if the data type is CWE, take the boolean/warning model of validate.
CTS Message Runtime API 5. Does code A imply code B? 6. Give me a list of the valid codes and display names for this vocabulary domain and context(s) in this language (which match this filter). (Identity functions: name, version, HL7 Release Version, description)
implies 1.There is currently no mechanism to ask the question WRT to the child code system. Will this nuance be needed?
CTS Vocabulary Runtime API 1.Is this code valid in this code system? 2.What is the preferred designation for this code in this language and context(s)? 3.Does a specific (directed) relationship exist between these two codes? 4.Return a hierarchically organized list of codes and designations (in the specified language) that have a given relationship with the supplied code. (identity + list of supported code systems)
Are codes related A false return does not necessarily imply that the code system was able to determine that a relationship was not *possible*, simply that such a relationship was not asserted. 1.Will we need a stronger function at some point to be able to ask whether the code system definitely says that the two codes are *not* related?
CTS Code Translation API 1.What is the translation (mapping) of the supplied code from code system x in code system y? (Identifying information – from and to code systems and versions, name, description, source or authority, contexts in which the service is applicable)
CTS Message Browser API 1.List all of the active attributes 2.List all of the active vocabulary domains 3.List all of the value sets 4.List all of the code systems (known to the browser) 5.Return the description, superclass, subclass(es), associated attributes and associated value sets of a named vocabulary domain.
CTS Message Browser API 6.Return the description, list of value sets used by, list of value sets using and code references for a supplied value set id. 7.Return the code system name and version of a supplied code system identifier 8.Return the value set (inc description, lists) that would be used for a given vocabulary domain and context(s) in a runtime situation. 9.Return a hierarchical list of codes associated with a given code set (pretty much what RoseTree or the listing in the Ballot returns) 10.Determine whether the supplied code is in the code set 11.(identification)
CTS Vocabulary Browser API 1.Get coded terms (and a whole bunch more information) whose designations, descriptions, match a supplied regular expression, language, context(s) and/or mime code(s). 2.Get coded terms (and a whole bunch o info) having property(s) that match a supplied regular expression, language, context(s) and/or mime code(s).
CTS Message Browser API 3. Get the designation(s) for a specific coded term that match the supplied regular expression, language, context(s) and/or mime code(s). 4.Get the descriptions 5.Get the properties (potentially selected from a list) that match the supplied regular expression, language, context(s) and/or mime code(s).
CTS Message Browser API 6. Return a nested list of concepts and the associated designations, relationship codes and relationship qualifiers that: a) Have the supplied concept code at the root b) are related via the supplied relationship code (opt) c) are either directly descendants or the transitive closure of the relationship (choice) d) have the named list of properties that optionally match the supplied regular expression in the supplied language, have the supplied qualifiers and/or have the supplied mime types. (Identifying information)
CTS Vocab Maintenance API 1.Create a new code system 2.Remove an existing code system 3.Add coded terms (inc properties, designations, etc) to a code system 4.Inactivate coded terms 5.Remove coded terms 6.Add properties to a coded term 7.Remove properties from a coded term 8.Add a coded term to a list of relationships 9.Remove coded term from a list of relationships
CTS API Currently –Specification language is IDL –Target languages are WSDL & Java –Process involves IDL->Java->WSDL->Java
CTS API IDL /* Determine whether the given code is valid in the code system * code - code to validate * activeOnly - true means code must be currently active, false * means both active and inactive pass * * Returns - true if the code exists in the current code system * false otherwise. */ V3DT::BL isCodeValid( in CTSCommon::ConceptId code, in V3DT::BL activeOnly ) raises (CTSCommon::UnknownCodeSystem);
CTS API Java (Part 1) /** * * Determine whether the given code is valid in the code system * code - code to validate * activeOnly - true means code must be currently active, false * means both active and inactive pass * * Returns - true if the code exists in the current code system * false otherwise. */ boolean isCodeValid (org.hl7.CTSCommon.ConceptId code, boolean activeOnly) throws org.hl7.CTSCommon.UnknownCodeSystem;
Java (Part 2) (Almost) no difference on InterFace specs Structs, however are now beans. Comments stripped earlier in the process (will fix…)
CTS API Specification language –Spec in WSDL? Cumbersome, but a semantic superset of IDL Tends to imply SOAP ITS –Spec in Java? Difficult to keep synched w/ WSDL Tends to imply Java ITS –OMG MDA? Possibility, but may yet be too immature
Message Browser API Complete prototype implementation Based on postgres image of Access DB Vocab Browser API Partial prototype implementation Based on ldap server image of Access DB
Vocab Runtime API Partial prototype implementation Based on ldap server image of Access DB
Samples SOAP Test
Samples Value Set Browser
Samples Useful JSPs
Samples Sample JSPs
Status Officially assuming the role of vocabulary maintenance. –Will maintain dual images for (at least) one cycle –Submission process will still be Excel spreadsheets for November RIM Harmonization –Intend to have new mechanism in place for following meeting.
Next Steps Part 1 Incorporate model changes and comments from session Incorporate Realm implementation Incorporate Ordinal interface Complete Message Maintenance Spec Publish revised, smaller and more readable specification for review and evaluation Integrate w/ RoseTree & RoseTree XML output
Next Steps Part 2 Finish implementation w/ more demos Revise vocab submission process Put together demo and proposal for distributed vocabulary maintenance using LDAP (which is, in part, why were here in the first place )
Question Would it be possible to move to the HL7 web site at some point? –Current implementation is Tomcat4 Axis Postgresql Openldap