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NGIC and BINAsia Jong Bhak NGIC KRIBB Korea. Acknowledgment APCTT Biotec Participants from Asian Countries Organizing staff MOSTfor support.

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Presentation on theme: "NGIC and BINAsia Jong Bhak NGIC KRIBB Korea. Acknowledgment APCTT Biotec Participants from Asian Countries Organizing staff MOSTfor support."— Presentation transcript:

1 NGIC and BINAsia Jong Bhak NGIC KRIBB Korea

2 Acknowledgment APCTT Biotec Participants from Asian Countries Organizing staff MOSTfor support

3 NGIC Chronicle NGIC Chronicle : National Genome Information Center Proposed : Detailed Establishment plan : NGIC Launched : Designated focal point for research data deposition : Initiation of BioInformation Portal Service : Data analysis system launched : National BioInformation Center Proposed : Detailed Establishment plan : (Konbic) Korea National BioInformation Center : (Konbic) Korea National BioInformation Center to be launched to be launched : National Genome Information Center Proposed : Detailed Establishment plan : NGIC Launched : Designated focal point for research data deposition : Initiation of BioInformation Portal Service : Data analysis system launched : National BioInformation Center Proposed : Detailed Establishment plan : (Konbic) Korea National BioInformation Center : (Konbic) Korea National BioInformation Center to be launched to be launched NGIC History

4 ,754 : Xeon Linux cluster Sun server Storage Origin3400 PC 7 PC 7 Xeon Linux cluster Sun server Storage Opteron Linux cluster PC 15 PC 15 Compaq server 1,997 Sun server Origin3400 PC 3 PC 3 Opteron Cluster Opteron Cluster 2 2 PC 20 PC 20 Xeon Linux cluster Sun server Storage Opteron Linux cluster 4,000 4,000 3, NGIC present NGIC present

5 KISTIKISTI NGIC ProteomicsFrontierProteomicsFrontier HumanGenomeFrontierHumanGenomeFrontier MicrobialGenomesMicrobialGenomes KNIHKNIH PlantResourceFrontierPlantResourceFrontier AgricultureResearchCentersAgricultureResearchCenters CattleResearchCentersCattleResearchCentersCropPlantFrontierCropPlantFrontier ETRIETRI Large-scaleDataGRID ApplicationGRID Operation network of NGIC

6 Genome TranscriptInteractomeFunctomeProteomeTextome Sequence Structure Expression Pathway Regulation Network Info Type OmeOme file Pipeline BioEngine DB BioDiversity Materials Bank BioResource 2ndary Info 2ndary DB BioMatrixBioMatrix

7 Automatic BioInformation Pipeline Processing System BioEngine IEA …. HapMap FESD PEIORF SNP CompGenome BioPortalBioPortal BioWikiBioWiki SiRNA TFExplorer ActivePromoter Repeatome GS2PATH SIGP BiozineBiozine BioJournalBioJournal KUGI SAGED NormPipe ArrayPort... Gene set Analyze … PSIMAP … PDS LoCalodom Stroke Textome

8 BioEngine ProteinStructure ProteinInteraction GeneRegulation CancerMicroarray ChemicalGenomics siRNA Biomarker SOL Stroke SNP Chimpanzee Biological DB Bioinformatic Tool BioPipeline 2ndary DBs Inhouse Bio Tool

9 BinAsia as I see 1 st stage: Biotechnology Introduction Network for Asia 2 nd stage: Bio Information Net for Asia –Information Infrastructure –Information experts and staff –IT hardware infra –Virtual network interfaced with web. –Regular meetings by focal nodes and focal node technicians

10 Practicals of BinAsia Establishment of working BioInformation Net BioTechnology List for local nodes –Agricultural BT Biofertilizer, BioIndicator, Bioremediation Biopesticides Biogas –Commercialization of local knowledge –Training program in BioInformation Handling –Language issues Inglish ?

11 Todos –Establishing working National nodes for BinAsia –Establishing working a central information node –Integrated BioInfo DBs for local nodes –Basic information gathering by local and central node –Value-added information generation & dissemination –Analysis of Asian BT and BioInfoTech –Next meeting in Thailand? –Adjusting BINAsia funding and operation. –License issues

12 Basic Info. Gathering Traditional knowledge in BT Statistics on BT (industry and schools) Bit BT projects –Shrimp genome –Casava genome project Translating local language to English

13 Future Asian Biotechnology Information Network Virtual Regional Center In workin with other Asian BioInformation Centers –AMBL –eIMBL –Counterpart to EBI BT info. network for AU (Asian Union?)

14 Virtual Bioinformatics Center

15 CJK bioinformatics Training course 5 th CJK bioinformatics training course Expansion of Training and Teaching program –http://biomoodle.net/

16 Proposed Role of NGIC for BINasia NGIC collects biotechnology DBs, information servers, tools and education materials NGIC serves a fast website for managing the above function. NGIC mirrors binasia.net site for backup. NGIC represents Korean node of BINasia NGIC supports BINasia meetings and administration

17 ASEAN and NGIC ASEAN + Korea bioinformatics network From year 2007, NGIC is likely to get more funding for international project such as BINAsia.


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