Presentation on theme: "SINAPSE THINK BIG think different Cognitive Engineering Lab Dynamic Functional Brain Connectivity: Perspectives and Further Directions 1 Scientific Visitor."— Presentation transcript:
SINAPSE THINK BIG think different Cognitive Engineering Lab Dynamic Functional Brain Connectivity: Perspectives and Further Directions 1 Scientific Visitor Dr.Dimitriadis Stavros (Greece) Neuroinformatics Group Aristotele University of Thessaloniki Dept.of Computer Science Workshop on Brain Connectivity: Structure and Function in Normal Brain and Disease Center of Life Sciences Auditorium, May 17 rd, 2013
Overview 2 First part: From Time-Varying Functional Connectivity Analysis to Functional Connectivity Microstates (FCμstates): Summarizing dynamic brain activity into a restricted repertoire of meaningful FCΜstates using EEG/fMRI Second part: Investigating Functional Cooperation from the Human Brain Connectivity via Simple Graph-Theoretic Methods
Brain Connectivity 3 Modes of brain connectivity. Sketches at the top illustrate structural connectivity (fiber pathways), functional connectivity (correlations), and effective connectivity (information flow) among four brain regions in macaque cortex. Matrices at the bottom show binary structural connections (left), symmetric mutual information (middle) and non-symmetric transfer entropy (right). Data was obtained from a large-scale simulation of cortical dynamics (see Honey et al., 2007).
Dynamic Functional Connectivity: 4 One would expect that fast fluctuations of Functional Connectivity (FC) will occur during spontaneous and task-evoked activity while plasticity and development are accompanied by slower and mutually interdependent changes in Structural Connectivity (SC) and FC. Computational models of large-scale neural dynamics suggest that rapid changes in FC can occur in the course of spontaneous activity, even while SC remains unaltered (Honey et al., 2007; Deco et al., 2009). Detailed analysis of electromagnetic time series data suggests that functional coupling between remote sites in the brain undergoes continual and rapid fluctuations (Linkenkaer-Hansen et al., 2001; Stam and de Bruin, 2004).
DFC Patterns 5 Interestingly, there is already experimental evidence suggesting that the emergence of a unified neural process is mediated by the continuous formation and dissolution of functional links over multiple time scales (Engel et al., 2001; Varela et al., 2001; Honey et al., 2007; Kitzbichler et al., 2009).
DFC Patterns 6 Network Metrics Time Series (NMTS) Dimitriadis et al., 2010
Dynamic Functional Connectivity: 7 Definition of time-window matters Dimitriadis et al., 2010
Macrostates - Microstates 8 From a Neuroscience Point of View: Functional Significance of EEG Microstates: In spontaneous EEG, four standard classes of microstate were distinguished, whose parameters (Lehmann et al., 1978) (e.g. duration, occurrences per second, covered percentage of analysis time, transition probabilities (Dimitriadis et al., 2013 under revision in HBM)) change as function of age While listening to frequent and rare sounds
Macrostates - Microstates 9 From a Neuroscience Point of View: Can you give an exemplar of Macrostate related to brain functionality ? We spend a third of our lives doing it !!!
From Scalp Potential Microstates to Functional Connectivity Microstates 10 From a Neuroscience Point of View: Multi-trial ERP Visual Paradigm
From Scalp Potential Microstates to Functional Connectivity Microstates 11 EEG Markovian chain Dimitriadis et al., 2013
From Scalp Potential Microstates to Functional Connectivity Microstates 12 From a Neuroscience Point of View: Poccurence of Fcμstates
From Scalp Potential Microstates to Functional Connectivity Microstates 13 Clusters related to FCμstates Topographies of functional clusters related to FCμstates detected for the ‘‘Left’’ ERP-trials Topographies of functional clusters related to FCμstates detected for the ‘‘Right’’ ERP-trials Dimitriadis et al., 2013
Markov State Models 14 Dimitriadis et al., 2013 Symbolic Time Series describe the Evolution of Fcμstates: e.g. 1 2 3 4 2 3 11 10 …… (a)Estimate directed Global efficiency in Codebook-networks: DGE stimulus > DGE baseline (b)We can quantify the deterministicity of the system based on an information- theoretic measure called: Entropy Reduction Rate ERT stimulus > ERT baseline
Tracking Whole-Brain Connectivity Dynamics in the Resting State (fMRI) 15 Allen et al. 2012
16 Allen et al. 2012
17 Allen et al. 2012 Prototyping Functional Connectivity Graphs
18 Allen et al. 2012 Occurrences of Prototypical FCGs
19 Allen et al. 2012 Transitions of Prototypical FCGs Markovian chain
20 Allen et al. 2012 ; Dimitriadis et al., 2013 Extracting Meaningful Measures from Markovian Chain 1.Duration of a Functional Connectivity Microstate 2.occurrences per second 3. covered percentage of analysis time, 4.transition probabilities (Dimitriadis et al., 2013 under revision in HBM) 5.Complexity 6.Deterministicity (Dimitriadis et al., 2013)
21 Meta-Analysis of Brain Data Neumann et al., 2005 1.Meta-Analysis of Functional Imaging Data e.g. Using Replicator Dynamics(Neumann et al., 2005)
22 Detect Motifs in Static/Dynamic FCGs (Iakovidou et al., 2012) 1.Discovery of group-consistent graph substructure patterns Monitoring Motif in A Dynamic Way Without a-priori definition of the n-motifs gSpan - algorithm
23 Mining Large Numbers of FCGs Univariate Power Spectrum /foci Multivariate Anderson et al., 2007 Increment of Degrees of Freedom Increment of the discriminative power to decode Different Brain States Simultaneously N N*(N-1)/2 = O(N 2 ) N*(N-1)= O(N 2 )
24 Brain Decoding Co-activated Areas (Foci) vs Co-activated graphs Anderson et al., 2007 Co-activated Graphs Co-activated Brain Areas (Foci)
25 Brain Decoding Cognitive States : attention, emotion, language, memory, mental imagery etc. Brain Diseases/Disorders: Dyslexia, ADHD, Alzheimer etc. Developmental changes General goal: 1.Understanding how the brain functions 2.Characterizing individual brain state across different tasks 3.Monitor Individual Cognitive Performance 4.Build significant biomarkers for the prevention of brain disorders 5.Monitor the improvement of the treatment (pharmacological/surgery) in brain disease subjects…
26 Neuroinformatics Group Aristotele University of Thessaloniki (Greece) Dr. Nikolaos Laskaris, Assistant Professor, Dept. of Informatics Group Websites : http://neuroinformatics.web.auth.gr/http://neuroinformatics.web.auth.gr/ http://neuroinformatics.gr/ Dr. Dimitrios Adamos, Researcher (Music Department/AUTH - Music Cognition) Dr. Efstratios Kosmidis,Lecturer of Physiology, Medical School, AUTH Dr.Areti Tzelepi, Researcher,Institute of Communication and Computer Systems
References 27 [ 1] Lehmann D & Skrandies W (1980) Reference-free identification of components of checkerboard-evoked multichannel potential fields. Electroenceph Clin Neurophysiol 48:609-621.  Deco, G., Jirsa, V., McIntosh, A.R., Sporns, O., Kötter, R., 2009. Key role of coupling, delay, and noise in resting brain ﬂuctuations. Proc. Natl. Acad. Sci. U. S. A. 106,10302–10307  Honey, C.J., Kötter, R., Breakspear, M., Sporns, O., 2007. Network structure of cerebral cortex shapes functional connectivity on multiple time scales. Proc. Natl. Acad. Sci. U. S. A. 104, 10240–10245  Linkenkaer-Hansen, K., Nikouline, V.V., Palva, J.M., Ilmoniemi, R.J., 2001. Long-range temporal correlations and scaling behavior in human brain oscillations. J. Neurosci. 21, 1370–1377.  Stam, C.J., de Bruin, E.A., 2004. Scale-free dynamics of global functional connectivity in the human brain. Hum. Brain Mapp. 22, 97–104. Dimitriadis SI, Laskaris NA, Tzelepi A. On the quantization of time-varying phase synchrony patterns into distinct Functional Connectivity Microstates (FCμstates) in a multi-trial visual ERP paradigm. IN PRESS 2013  Dimitriadis SI, Laskaris NA, Tsirka V, Vourkas M, Micheloyannis S, Fotopoulos S.Tracking brain dynamics via time- dependent network analysis. Journal of Neuroscience Methods Volume 193, Issue 1, 30 October 2010, pp. 145-155. 8) Dimitriadis SI, Laskaris NA, Tzelepi A, Economou G.Analyzing Functional Brain Connectivity by means of Commute Times: a new approach and its application to track event-related dynamics. IEEE (TBE)Transactions on Biomedical Engineering, Volume 59, Issue 5, May 2012, pp.1302-1309. Allen et al., Tracking Whole-Brain Connectivity Dynamics in the Resting State Cereb. Cortex (2012)doi: 10.1093/cercor/bhs352.  Federico Cirett Gal´an and Carole R. Beal.EEG Estimates of Engagement and Cognitive Workload Predict Math Problem Solving Outcomes. UMAP 2012, LNCS 7379, pp. 51–62, 2012.  Mohammed Mostafa Yehia. EEG - Mental Task Discrimination by Digital Signal Processing  Jack Culpepper. Discriminating Mental States Using EEG Represented by Power Spectral Density
References 28  Cheng-Jian Lina & Ming-Hua Hsieh.Classiﬁcation of mental task from EEG data using neural networks based on particle swarm optimization. Neurocomputing 72 (2009) 1121– 1130  Charles W. Anderson, Zlatko Sijercic. Classification of EEG Signals from Four Subjects During Five Mental Tasks Proceedings of the Conference on Engineering Applications in Neural Networks (EANN’96)  Iakovidou N, Dimitriadis SI, Tsichlas K, Laskaris NA, Manolopoulos Y. On the Discovery of Group-Consistent Graph Substructure Patterns from brain networks. Neuroscience Methods,Volume 213, Issue 2, 15 March 2013, pp. 204–213