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Copyright © 2013, SAS Institute Inc. All rights reserved. LEVERAGE THE CDISC DATA MODEL TO STREAMLINE ANALYTICAL WORKFLOWS KELCI J. MICLAUS, PH.D. RESEARCH AND DEVELOPMENT MANAGER JMP LIFE SCIENCES SAS INSTITUTE, INC.
Copyright © 2013, SAS Institute Inc. All rights reserved. INTRODUCTION SAS CLINICAL RESEARCH INFORMATION FLOW EDC (Rave) EDC (Other) Adapters / Interfaces ePRO and others Labs and other external sources Raw data Internal systems Metadata, integration and standardization management SAS Clinical Data Integration External metadata (RDF, OWL, etc.) SAS Drug Development Data and analytics platform SDTM ADaM Others Real-world data Raw data Metadata Submission data sets Tables, figures and listings Pooled analyses Patient Profiles/ Medical Review/RBM CDISC JMP Clinical SAS Visual Analytics Exploration across and beyond trials Transparency initiatives Adapters / Interfaces Dictionary coding (TMS)
Copyright © 2013, SAS Institute Inc. All rights reserved. JMP CLINICAL LEVERAGING CDISC IN ANALYTICAL WORKFLOWS Integrated solution of JMP and SAS platforms All analyses built on SDTM/ADaM standards. Build Clinical Reviews for variety of consumers: Medical Monitoring Signal Detection Data Quality and Fraud Detection Risk Based Monitoring Patient Profiles and auto-generated Adverse Event Narratives Open system of SAS programming macros to allow for consumer customization
Copyright © 2013, SAS Institute Inc. All rights reserved. JMP CLINICAL SOLUTION PROVIDES… Statistically-driven, dynamic data visualization that is key to efficient clinical review Data standards support for streamlined/standardized analyses that enable clinicians, data monitors, data managers, and statisticians Tools for snapshot comparison accelerate reviews Integrations with broader SAS solutions (Metadata Server, CDI, SDD)
Copyright © 2013, SAS Institute Inc. All rights reserved. JMP CLINICAL DATA MANAGEMENT EFFICIENT REVIEWS THROUGH SNAPSHOT COMPARISON Comparisons between current and previous data snapshot accelerate clinical review to avoid redundant work effort Keys allow record-level and subject-level categorization to flag new and updated data Record-level: Record-level: New, Modified, Stable, Dropped, Non-Unique (Duplicate) Subject-level: Subject-level: New Records, Modified Records, Stable, Introduced Keys are system-defined based on CDISC Key recommendation or user-generated
Copyright © 2013, SAS Institute Inc. All rights reserved. JMP CLINICAL INTEGRATION WITH SAS DRUG DEVELOPMENT (SDD) Enable JMP Clinical users to access study data stored in SDD No web login or drive-mapping required Snapshot of most current version of files in SDD Future version will enable users to select “as-of” date Supports SDD 3.x future version of integration to support 4.x
Copyright © 2013, SAS Institute Inc. All rights reserved. JMP CLINICAL LEVERAGING THE STANDARDS CDISC variable usage architecture: Tracks Tracks all SDTM/ADaM variable usage (required and optional) in analysis reports Documents Documents variable specifications with pre-/post- study data tables and reports, variable narratives, and in analysis report dialogs Executes Executes algorithmic logic to restrict availability of analysis reports for studies based on variable requirements
Copyright © 2013, SAS Institute Inc. All rights reserved. Live Demonstration CDISC Variable Usage Clinical Starter Menu Review Builder Patient Profile and Narratives
Copyright © 2013, SAS Institute Inc. All rights reserved. PATIENT PROFILE REPORT
Copyright © 2013, SAS Institute Inc. All rights reserved. PATIENT PROFILE TABLES REPORT
Copyright © 2013, SAS Institute Inc. All rights reserved. JMP CLINICAL REPORTS AUTO-GENERATED AE PATIENT NARRATIVES
Copyright © 2013, SAS Institute Inc. All rights reserved. JMP CLINICAL SIGNAL DETECTION SAFETY SIGNAL DETECTION Statistically-driven volcano plots (Jin et al. 2001, Zink et al. 2013) Space-constrained view of several hundred AE events Difference in observed AE risk vs. statistical significance Color illustrates direction of effect Bubble size reflects AE frequency Traditional relative risk plot (Amit et al. 2008) to display interesting signals
Copyright © 2013, SAS Institute Inc. All rights reserved. JMP CLINICAL SIGNAL DETECTION ANALYSIS COMPLEXITIES ADDRESSED WITH JMP CLINICAL Abundance of endpoints (multiplicity) False discovery rate (FDR) Benjamini & Hochberg (1995) Double FDR (Mehrotra & Heyse 2004, Mehrotra & Adewale, 2012) Bayesian Hierarchical Models Repeated/recurrent events Inclusion of time windows across analyses Trial design complexity Crossover analysis and visualization Limited population and understanding of biological underpinnings Cross-domain predictive models Subgroup analysis Pharmacogenomics
Copyright © 2013, SAS Institute Inc. All rights reserved. JMP CLINICAL DATA MANAGEMENT SNAPSHOT COMPARISON ANALYSIS TOOLS Domain Data Viewing Use of color/annotate New, Modified, and Stable records System-generated record-level notes describe changes in variables
Copyright © 2013, SAS Institute Inc. All rights reserved. JMP CLINICAL DATA MANAGEMENT SNAPSHOT COMPARISON ANALYSIS TOOLS Track data/record updates and review status at subject level patient profile
Copyright © 2013, SAS Institute Inc. All rights reserved. JMP CLINICAL DATA MANAGEMENT SNAPSHOT COMPARISON ANALYSIS TOOLS Use derived flags to filter analysis views to see modified/new data Compare distributions of new versus previous records
Copyright © 2013, SAS Institute Inc. All rights reserved. MANAGING AND ANALYZING CLINICAL DATA MARK LAMBRECHT, PRINCIPAL INDUSTRY CONSULTANT, SAS BIAS.
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White Papers to Fill the Gaps of Standardization of Tables, Figures, and Listings (Creating Standard Targets) Analyses and Displays for Vital Signs, ECG,
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