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Search for cellular attachment receptors used by a GII.4 Norovirus Dijon Gaurav Dutta Dwivedi Supervisors: Niklas Arnberg and Carin Årdahl.

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Presentation on theme: "Search for cellular attachment receptors used by a GII.4 Norovirus Dijon Gaurav Dutta Dwivedi Supervisors: Niklas Arnberg and Carin Årdahl."— Presentation transcript:

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2 Search for cellular attachment receptors used by a GII.4 Norovirus Dijon Gaurav Dutta Dwivedi Supervisors: Niklas Arnberg and Carin Årdahl

3 Introduction Norovirus are a group of viruses that cause non bacterial gastroenteritis in humans. The first outbreak of Norovirus infection was reported in Norwalk, Ohio in Human Norovirus infection is popularly known as winter vomiting disease. Norovirus outbreaks frequently occur in community surroundings. Noroviruses are predominantly infectious and highly stable in the environment and immunity following infection generally is short-lived.

4 Dehydration Nausea and Vomiting Diarrhea Fever Abdominal cramping Symptoms of Norovirus infection Incubation period is 24 to 48 hours, with the symptoms lasting 12 to 60 hours. Infected hosts can shed virus in stool for up to 2 weeks.

5 Transmission of Norovirus

6 Noroviruses infect individuals with a functional alpha-1, 2-fucosyltransferase (FUT2) gene and are designated as secretor-positive and those with defected FUT2 gene are termed as secretor-negative,they are resistant to the common GII.4 strain, however they can still get infected with other Norovirus strains. Human Noroviruses recognize histo-blood group antigens (HBGAs) that are expressed on the surface of mucosal epithelial cells.

7 Norovirus Classification The genogroup II, genotype 4 Noroviruses, designated GII.4, are currently responsible for 70–80% of Norovirus outbreaks worldwide.

8 Viral Morphology  Family Caliciviridae.  Single-stranded, positive-sense RNA genome of ~7.7 kb.  Non-enveloped and icosahedral.  nm.  The viral genome encodes one major structural protein of 60 kDa which forms viral capsid.  Capsid 180 molecules, folds into 90 dimers.

9 Norovirus genome comprises of three open reading frames (ORFs). ORF1 encodes the non-structural proteins that are crucial for virus replication, ORF2 and ORF3 encode a major capsid protein VP1 and a minor structural protein VP2, respectively. VP1 consists of shell domain (S) and the protruding domain (P). P domain is further divided into two subdomains known as P1 and P2. Unpublished observations indicate that the presence of specific integrin-binding motifs plays a role in interactions for binding to integrins and allows virus particles attachment to the host cells.

10 Aim To explore cellular receptors used by the GII.4 Human Norovirus (NoV) Dijon Virus Like Particles (VLPs) and analyse its binding characteristics across various integrin expressing cells.

11 Why we used Norovirus like particles (NoV-LPs) in the present study ? The study of NoV has been hampered by the lack of an efficient cell culture system, which is still not available for Human NoV.

12 Methods The Dijon NoV-LPs used were produced in Sf9 insect cells. The VLPs were clarified using ultracentrifugation and sucrose density gradient methods, finally the purity was confirmed by using SDS-PAGE and Western blot. Flow cytometry was used for evaluation of binding characteristics of NoV-LPs across various integrin expressing cells.

13 Production of VLPs Sf9 cell culture 40% Sucrose density gradient SDS-PAGE Incubate at 130 rpm,28 ˚C, 5 days Centrifuge at 3000 g,30 min Ultracentrifuge supernatant at rpm,2hrs,4˚C Collect the fractions Detection of produced NoV- LPs. Figure 1 showing the Western blot results of Dijon NoV-LPs in various concentrations probed with primary antibody (rabbit-anti- NoV, serum) and secondary antibody (HRP-conjugated- swine-anti-rabbit) which is compared with the control (lane 5). Lane 1: Dijon, 2 µg Lane 2: Dijon 10 µg. Lane 3: Dijon 2 µg. Lane 4: Dijon 10 µg. Lane 5: Dijon control (from LiU). Figure 1 Western blot 20% 30% 50% 60% Ultracentrifuge at rpm,4hrs,4˚C. Loading on gel Collected fractions

14 FACS BD LSRII Cell culture 96 well plate Centrifuge NoV-LPs Wash 3 X with 100 µl of PFN and centrifuge every time. Detach cells and Transfer cells/well. Incubate with primary and secondary antibody rabbit-anti-NoV goat-anti-rabbit Alexa Flour 647 Incubate with added VLPs Wash 3X with 100 µl of PFN and transfer Into FACS tubes and analyse the binding. Wash with PFN buffer and incubate with the antibodies Binding Assay Centrifuge at 1300 rpm,4˚C for 5 mins

15 SDS-PAGE showing Fractions1-9 of the produced VLPs SDS-PAGE of cell lysate from the sf9 cell culture Results Pooled 3-5Pooled 6-7

16 Protein gel of pooled concentrated GII.4 Dijon (100K, Amicon filter)

17 Binding characteristics of NoV-LPs to integrin expressing cells Figure 1 and Figure 2 represents the binding percentage of various integrin expressing cells to NoV-LPs. Figure 1 Figure 2

18 Western blot for the produced VLPs Figure 3 Detection of produced NoV-LPs. Figure 3 showing the Western blot results of Dijon NoV-LPs in various concentrations probed with primary antibody (rabbit-anti-NoV, serum) and secondary antibody (HRP-conjugated-swine- anti-rabbit).

19 Conclusion In conclusion, the production and characterization of GII.4 NoV-LPs in insect cells was validated in this study. Western blot detected NoV-LPs using NoVs raised antibodies from rabbit sera. This receptor binding study indicates approximately 2-6 times increased binding of NoV-LPs to various integrin expressing cells signifying the importance of integrins as candidate receptors for NoV.

20 Future directions  Repetition of binding experiments with more integrin expressing cell lines.  Immortalization and replication studies using human cells.  Blocking studies for analyzing Norovirus binding.

21 Acknowledgement  Carin Årdahl thesis supervisor.  Professor Niklas Arnberg Division of Virology, Umeå university.  Division of Medical Microbiology, Department of Clinical and Experimental Medicine, LiU(Linköping University), Linköping, Sweden.

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