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GPU Supercomputer Simulation of Complete H1N1 virus Brandon Abbott.

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Presentation on theme: "GPU Supercomputer Simulation of Complete H1N1 virus Brandon Abbott."— Presentation transcript:

1 GPU Supercomputer Simulation of Complete H1N1 virus Brandon Abbott

2 Motivation / Objective Swine Flu / H1N1 Pandemic Summary  Combination of bird, pig, and human flu virus  First in the US April of 2009  Nov 14 th 2009 –  200,000 hospitalizations  10,000 deaths

3 Chinese H1N1 Flu Study - Goals  Institute of Process Engineering of Chinese Academy of Sciences (CAS-IPE)  “A computational microscope”  Goals:  To control epidemics  To create anti-viral drugs  To see the whole process of the reactions  Reactions under a real microscope often occur too quickly.

4 GPU Super Computing Method  Mole 8.5 Supercomputer  2,200 NIVIDIA Telsa GPU’s  288 Server nodes  Able to simulate the whole H1N1 virus at an atomic level  Each day they simulated…  770 picoseconds of simulation (1 trillionth of a second)  Stepping at 1 femtosecond (1 quadrillionth of a second)  300 million atoms simulated.

5 Why I chose this topic

6 References     tap-gpu-supercomputer-for-worlds-first-simulation-of- complete-h1n1-virus ?reflink=MW_news_stmp tap-gpu-supercomputer-for-worlds-first-simulation-of- complete-h1n1-virus ?reflink=MW_news_stmp


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