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Welcome Advanced Bioinformatics BIF-30806. Content of the course Basic Linux Perl scripting Bioinformatics Software Protein networks Protein Interactions.

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Presentation on theme: "Welcome Advanced Bioinformatics BIF-30806. Content of the course Basic Linux Perl scripting Bioinformatics Software Protein networks Protein Interactions."— Presentation transcript:

1 Welcome Advanced Bioinformatics BIF-30806

2 Content of the course Basic Linux Perl scripting Bioinformatics Software Protein networks Protein Interactions Protein function prediction NGS RNA-seq Comparative genomics Project

3 Teachers Harm Nijveen Sandra Smit Gabino Sanchez Perez Edouard Severing Hendrik-Jan Megens Aalt-Jan van Dijk Elio Schijlen Ke Lin Joachim Bargsten Pjotr Prins Saulo Alves Aflitos Robert Ernst Ioannis Moustakas

4 Grading Exercises(8) + Perl exam30% Project Report50% Project Presentation20% (inter)active participation during lectures and practical sessions is highly appreciated

5 Hours Mornings: Afternoon: 13 – 17 Coffee/tea breaks as required

6 Project Create an analysis pipeline using Perl to answer a biological question 2 weeks Small teams of ~4 students One report and presention per student

7 Perl Introduction to the language Focus on practical use Exercises numbered should to be mailed before Feb 15, 17h to: Exam at the end of week one


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