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1 A Bayesian Approach to the ICH Q8 Definition of Design Space John J. Peterson Senior Director, Research Statistics Unit GlaxoSmithKline Pharmaceuticals.

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Presentation on theme: "1 A Bayesian Approach to the ICH Q8 Definition of Design Space John J. Peterson Senior Director, Research Statistics Unit GlaxoSmithKline Pharmaceuticals."— Presentation transcript:

1 1 A Bayesian Approach to the ICH Q8 Definition of Design Space John J. Peterson Senior Director, Research Statistics Unit GlaxoSmithKline Pharmaceuticals Graphically accessible Historical information (hard or soft) can be used 2008 Graybill Conference, Fort Collins, Co. June 11 th -13 th, 2008

2 2 ICH Q8 Definition of Design Space The ICH Q8 FDA Guidance for Industry defines "Design Space" as: "The multidimensional combination and interaction of input variables (e.g. material attributes) and process parameters that have been demonstrated to provide assurance of quality.“ Further more…. “Working within the Design Space is not considered as a change. Movement out of the Design Space is considered to be a change and would normally initiate a post regulatory approval change process. Design Space is proposed by the applicant and is subject to regulatory assessment and approval”.

3 3 ICH Q8 Definition of Design Space The ICH Q8 FDA Guidance for Industry defines "Design Space" as: "The multidimensional combination and interaction of input variables (e.g. material attributes) and process parameters that have been demonstrated to provide assurance of quality.“

4 4 ICH Q8 Definition of Design Space The ICH Q8 FDA Guidance for Industry defines "Design Space" as: "The multidimensional combination and interaction of input variables (e.g. material attributes) and process parameters that have been demonstrated to provide assurance of quality.“ Three key concepts: 1. Measurement For example: controllable factors, input material attributes, in-process measurements, quality response measurements.

5 5 ICH Q8 Definition of Design Space The ICH Q8 FDA Guidance for Industry defines "Design Space" as: "The multidimensional combination and interaction of input variables (e.g. material attributes) and process parameters that have been demonstrated to provide assurance of quality.“ Three key concepts: 1. Measurement For example: controllable factors, input material attributes, in-process measurements, quality response measurements. 2. Prediction - Models to relate the measurements to the relevant quality responses. These need to be compared to specifications for quality. - Need to be able to predict means AND variances of responses.

6 6 ICH Q8 Definition of Design Space The ICH Q8 FDA Guidance for Industry defines "Design Space" as: "The multidimensional combination and interaction of input variables (e.g. material attributes) and process parameters that have been demonstrated to provide assurance of quality.“ Three key concepts: 1. Measurement For example: controllable factors, input material attributes, in-process measurements, quality response measurements. 2. Prediction - Models to relate the predictive measurements to the quality responses. These need to be compared to specifications for quality. - Need to be able to predict means AND variances of quality responses. 3. Reliability To quantify “How much assurance?” The QbD-oriented guidance (PAT, ICH Q8, Q9, Q10, etc) is inundated with the words “risk” and “risk-based”.) See presentation by H. Gregg Claycamp (CDER), “Room for Probability in ICH Q9”

7 7 responses (Y 1, Y 2,…) Control Factors/Parameters (F 1, F 2, …) Input material measurements (W 1, W 2, …) Responses have specification limits which define Quality: { A iL < Y i < A iU } Vector of predictive variables, x = (f,w,z) In-process measurements (Z 1, Z 2, …) heat transfer, NIR A Generic Process (or Unit Operation) Measurements

8 8 Prediction Models The Standard Multivariate Regression Model The Seemingly Unrelated Regressions model x = (x 1,…x k ) vector of predictive variables r = no. of response types. Fitted models give us predicted responses, i.e. but we need to know the variances of the also to assess risk. Other models? e.g. Nonlinear, PLS, Wavelets, etc.

9 9 Reliability Model How much assurance do we have of meeting specifications? Consider If we knew we could define a Design Space as for some reliability level R. From a Bayesian perspective one could consider the posterior expectation: to obtain the Bayesian Design Space:

10 10 Aside….what is a posterior predictive distribution? A posterior predictive distribution is used to compute If is the pdf for Y, then g(y | x, data) is the posterior predictive pdf with where is the posterior distribution of  and . So

11 11 In most situations, Markov Chain Monte Carlo techniques will be used to compute,……………...., MCMC

12 12 Design Space From a Bayesian perspective one could consider the posterior expectation: Computationally, is straightforward to compute using MCMC. Experiments with multiple batches, split plots, missing data, noise variables and even heavy-tailed residual distributions can be handled with MCMC. In theory it is also possible to handle latent variable models that may be needed for “functional data” from in-process measurements (e.g. Bayesian PLS, Wavelets, etc.) The classical multiple response surface approaches found in Design Expert, JMP, Statistica, etc. fall short of providing a good reliability models!

13 13 ICH Q8 Annex: Design space can be determined from the common region of successful operating ranges for multiple CQA’s. The relations of two CQA’s, i.e., friability and dissolution, to two parameters are shown in Figures 2a and 2b. Figure 2c shows the overlap of these regions and the maximum ranges of the potential design space. Taken from the ICH Q8 Annex. (August 2007) What do these contours represent? Mean response surfaces? This overlay plot does not quantify “How much assurance?”!

14 14 Taken from PQLI* Design Space by Lepore and Spavins (J. of Pharm. Innovation, 2008) *PQLI = Pharmaceutical Quality Lifecycle Implementation What do these contours represent? Mean response surfaces? (The paper does not say.) This overlay plot does not quantify “How much assurance?”!

15 15 Example: An intermediate stage of a multi-stage route of manufacture for an Active Pharmaceutical Ingredient (API). Measurements: Four controllable quality factors ( x ’s) were used in a designed experiment. (x1=‘catalyst’, x2= ‘temperature’, x3=‘pressure’, x4=‘run time’.) A (face centered) Central Composite Design (CCD) was employed. (It was a Full Factorial (30 runs), with no aliasing.) Four quality-related response variables, Y ’s, were measured. (These were three side products and purity measure for the final API.) Y1= ‘Starting material Isomer’, Y2=‘Product Isomer’, Y3=‘Impurity #1 Level’, Y4=‘Overall Purity measure’ Quality Specification limits: Y1 =95%. Multidimensional Acceptance region, Overlapping Means vs. Bayesian Reliability Approach to Design Space: An Example – due to Greg Stockdale, GSK.

16 16 Overlapping Means vs. Bayesian Reliability Approach to Design Space: An Example – due to Greg Stockdale, GSK. Prediction Models: Model Terms Response x1x2x3x4x11x22x33x44x12x13x14x23x24x34 SM Isomer  Prod Isomer  Impurity  Purity  Temperature = x1 Pressure = x2 Catalyst Amount = x3 Reaction time = x4

17 17 An Overlapping means approach to Design Space for an Active Pharmaceutical Ingredient (API) The so-called “sweet spot” highlighted in yellow The Design Space is the “Sweet Spot” Highlighted in Yellow below

18 18 Why is the “sweet spot” not so sweet? If the mean of Y at a point x is less than an upper bound, u, then all that guarantees is that (For there is no guarantee that Suppose. If Y 1 and Y 2 were independent, then all that is guaranteed is that For k independent Y i ’s the situation becomes: If Y 1 and Y 2 are positively correlated then it may be easier to find x-points to make large. Likewise, if Y 1 and Y 2 are negatively correlated (for each x) then it may be more difficult. Note: Corr(Y 3, Y 4 | x) is about -0.8 for the API experiment.

19 19 Why is a multivariate reliability approach needed? (Accounting for correlation among the responses…a simple example) Suppose we have a process with four key responses, Y 1, Y 2, Y 3, Y 4 For simplicity, let’s assume that Let Consider If  = I, then But if then and if

20 20 Overlapping Means vs. Bayesian Reliability Approach to Design Space: An Example Overlapping Mean Response Surface Approach – Can be computed using SAS/JMP, Design Expert, Minitab, etc. The “sweet spot” region is determined by the overlapping mean response surfaces that are all simultaneously within their specification limits. However the overlapping mean response approach: (i) Does not take into account the model parameter uncertainty (ii) Does not provide a measure of assurance to say “How likely it is that future responses will meet their specifications.” (iii) Does not take into account the correlation structure of the multivariate distribution of future responses. Thus the overlapping means approach does not address the question begged by the ICH Q8 definition of Design Space…namely, “How much assurance do we have of meeting process quality specifications?”

21 21 Overlapping Means vs. Bayesian Reliability Approach to Design Space: An Example A Bayesian Reliability Response Surface Approach – A posterior predictive approach: (i) Takes into account the model parameter uncertainty (ii) Provides a measure of assurance to say “How likely it is that future responses will meet their specifications.” (iii) Takes into account the correlation structure of the multivariate distribution of future responses. Thus the Posterior predictive approach addresses the question begged by the ICH Q8 definition of Design Space…namely, “How much assurance do we have of meeting process quality specifications?” Both graphical and tabular approaches can be used with the posterior predictive approach to better understand the resulting Design Space.

22 22 A Bayesian Reliability Approach to Design Space: API Example A posterior Predictive Response Surface Approach – How likely is it that a future multivariate response will meet specifications for a factor configuration in the sweet spot? Consider the posterior predictive probability p ( x )= Pr ( Y is in A | x, data). Here, Y is assumed to have a multivariate normal distribution. A is the multidimensional acceptance region. The standard noninformative prior for  and  is used,, where r = 4, the number of response types. Pr ( Y is in A | x, data) is computed using Gibbs Sampling, one of the Markov Chain Monte Carlo (MCMC) simulation methods. The largest probability of meeting specifications is only about This is corresponds to the best p ( x ) value within the yellow “sweet spot” of overlapping mean response surfaces. The worst p ( x ) value in the “sweet spot” is only 0.23 !

23 23 Design Space Table of Computed Reliabilities 1 for the API (sorted by joint probability 2 ) TempPressureCatalystRxntime Joint Prob SM Isomer Prob Prod Isomer Prob Impurity Prob Purity Prob [1] This is only a small portion of the Monte Carlo output. [2] values were computed using SAS IML Optimal Reaction Conditions Marginal Probabilities Note that the largest probability of meeting specifications is only about 0.75

24 24 Posterior Predicted Reliability with Temp=20 to 70, Catalyst=2 to 12, Pressure=60, Rxntime=3.0 Catalyst Temp Pressure Rxntime Overlapping Mean Contours from analysis of each response individually. = Design Space Contour plot of p( x ) equal to Prob ( Y is in A given x & data). The region inside the red ellipse is the design space. x1=x1= x2=x2= But this x -point (in the yellow sweet spot) has a probability of only 0.23 ! This x -point (in the yellow sweet spot) has only a probability of 0.75.

25 25 Greg Stockdale

26 26 Question…. “How large should R be to calibrate the Design Space: Note: “Based upon some historical precedents (e.g. three out of three successful manufacturing validation runs), some deductions about a value of R can be made” “Three consecutive successful batches has become the de facto industry practice, although this number is not specified in the FDA guidance documents.” Schneider, Huhn, and Cini, (2006), PAT Insider Magazine, April issue. A Question for the Audience

27 27 Suppose that Z ~ Bernoulli( p ) and that p has a beta prior, Beta(a,b). Consider the likelihood based on 3Bernoulli trials, Consider Let Then p has a beta posterior distribution Beta(s+a, 3-s+b). The posterior predictive distribution of new Z is beta-binomial and For a uniform prior on [0,1], i.e. Beta (1,1), and s = 3 (out of 3 trials) we get: So is R =0.8 a reasonable value with which to calibrate a Design Space? “How large should R be to calibrate the Design Space?”

28 28 “How large should R be to calibrate the Design Space?” If R =0.8 is not large enough (e.g. we want R =0.95, say), but some manufacturing processes have been approved, based upon 3 out of 3 successfully manufactured batches, what does this mean? Clearly, some prior information must have been utilized. Consider a beta prior Beta(a,b) with a=16, b=1. Then for 3 out of 3 successes: What does a beta prior distribution with a=16, b=1 look like? The 5 th percentile is 0.83

29 29 “How large should R be to calibrate the Design Space?” This deduction implies that either: R =0.8 is an acceptable de facto lower bound for calculating a Design Space. OR Strong prior information should be allowed in the calibration of a Design Space. Based on historical precedent….

30 30 The Flexibility Offered by a Bayesian Approach to Design Space A “pre-posterior analysis” can be performed to identify where additional information may be needed to improve design space calibration (by reducing model parameter uncertainty). Noise variables are easily incorporated so that “robust parameter design” optimization can be done. (This is important for multistage processes.) Can accommodate small amounts of missing data in a straightforward fashion. The Bayesian approach can handle mixed-effect models in a straightforward manner. This has useful applications for split-plot designs and (random) batch effects. The Bayesian approach can also be adapted to nonlinear mechanistic models.

31 31 Summary Challenges to Constructing the ICH Q8 Design Space The challenges….my opinion…. Getting clients to recognize the key elements of MPR: Measurements, Prediction model, Reliability Model, particularly the importance of a reliability model to quantify “How much assurance?” Computational issues. These can be solved with sufficient effort. The Bayesian approach provides a unifying paradigm.

32 32 From the ICH Q8 Annex: (my highlights in red) An enhanced quality by design approach to product development would additionally include the following elements: A systematic evaluation, understanding and refining of the formulation and manufacturing process, including: Identifying, through e.g., prior knowledge, experimentation, and risk assessment, the material attributes and process parameters that can have an effect on product CQAs; Determining the functional relationships that link material attributes and process parameters to product CQAs. Using the enhanced process understanding in combination with quality risk management to establish an appropriate control strategy which can, for example, include a proposal for design space(s) and/or real-time release. The Bayesian approach can address the concerns of ICH Q8 in a coherent, unifying manner.

33 33 Acknowledgements Gregory Stockdale Aili Cheng Tim Schofield Paul McAllister Michael Denham Gillian Amphlett Mohammad Yahyah Kevin Lief Val Fedorov Darryl Downing

34 34 References Claycamp, H. G. (2008), “Room for Probability in ICH Q9: Quality Risk Management“, presented at the Pharmaceutical Statistics 2008: Confronting Controversy conference., March 2008, Arlington, VA. (sponsored by the Institute of Validation Technology). ICH Q8 (2006), “Guidance for Industry Q8 Pharmaceutical Development”. ICH Q8 (2007), “Pharmaceutical Development Annex to Q8” Miró-Quesada, G., del Castillo, E., and Peterson, J. J. (2004), “A Bayesian Approach to for Multiple Response Surface Optimization with Noise Variables”, Journal of Applied Statistics, 31, Peterson, J. J. (2004), “A Posterior Approach to Multiple Response Surface Optimization, Journal of Quality Technology, Peterson, J. J. (2007) “A Bayesian Approach to the ICH Q8 Definition of Design Space”. Proceedings of The American Statistical Association, Biopharmaceutical Section. (Also to appear in the Journal of Biopharmaceutical Statistics in fall 2008.) Peterson, J. J. (2008). “A Bayesian Reliability Approach to Multiple Response Surface Optimization with Seemingly Unrelated Regressions Models”, Quality Technology and Quantitative Management, (to appear). Stockdale, G. and Chen, A. (2008), “Finding Design Space and Reliable Operating Region using a Multivariate Bayesian Approach with Experimental Design”, Quality Technology and Quantitative Management, (to appear). If you are interested in a copy of the slides send to:


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