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Published byXavier Saker
Modified over 5 years ago
SPM Software & Resources Wellcome Trust Centre for Neuroimaging University College London SPM Course London, May 2011
Normalisation Statistical Parametric Map Image time-series Parameter estimates General Linear Model RealignmentSmoothing Design matrix Anatomical reference Spatial filter Statistical Inference RFT p <0.05
Software: SPM8 Open Source academic freeware (under GPL) Documented and informally supported Requirements: –MATLAB: 7.1 (R14SP3) to 7.10 (R2010a) no Mathworks toolboxes required –Supported platforms (MEX files): –File Formats: Images: NIfTI-1 (& Analyze, DICOM) Surface meshes: GIfTI M/EEG: most manufacturers (with FieldTrip’s fileio) Linux (32 and 64 bit)Windows (32 and 64 bit) Mac Intel (32 and 64 bit)
SPMweb Introduction to SPM SPM distribution: SPM2, SPM5, SPM8 Documentation & Bibliography SPM email discussion list SPM short course Example data sets SPM extensions http://www.fil.ion.ucl.ac.uk/spm/
SPM Toolboxes User-contributed SPM extensions: http://www.fil.ion.ucl.ac.uk/spm/ext/
SPM Documentation Peer reviewed literature SPM Books: Human Brain Function I & II Statistical Parametric Mapping Online help & function descriptions SPM Manual
SPM Online Bibliography
External Resources SPM @ Wikipedia http://en.wikipedia.org/wiki/Statistical_parametric_mapping SPM @ Scholarpedia http://www.scholarpedia.org/article/SPM SPM @ WikiBooks http://en.wikibooks.org/wiki/SPM MRC-CBU Imaging/MEG wiki http://imaging.mrc-cbu.cam.ac.uk/imaging/CbuImaging http://imaging.mrc-cbu.cam.ac.uk/meg SPM @ NITRC http://www.nitrc.org/projects/spm/
SPM Mailing List email@example.com Web home page –http://www.fil.ion.ucl.ac.uk/spm/support/ –Archives, archive searches, instructions Subscribe –http://www.jiscmail.ac.uk/ –email firstname.lastname@example.org –join spm Firstname Lastname Participate & learn –email email@example.com –Monitored by SPMauthors –Usage queries, theoretical discussions, bug reports, patches, techniques, &c… firstname.lastname@example.org http://www.fil.ion.ucl.ac.uk/spm/support/
The General Linear Model (GLM)
Bayesian Inference Lee Harrison York Neuroimaging Centre 14 / 05 / 2010.
SPM – introduction & orientation introduction to the SPM software and resources introduction to the SPM software and resources.
Overview of SPM p <0.05 Statistical parametric map (SPM)
The General Linear Model Christophe Phillips Cyclotron Research Centre University of Liège, Belgium SPM Short Course London, May 2011.
SPM Course Zurich, February 2012 Statistical Inference Guillaume Flandin Wellcome Trust Centre for Neuroimaging University College London.
SPM 2002 Experimental Design Daniel Glaser Institute of Cognitive Neuroscience, UCL Slides from: Rik Henson, Christian Buchel, Karl Friston, Chris Frith,
SPM Software & Resources Wellcome Trust Centre for Neuroimaging University College London SPM Course London, October 2008.
SPM for EEG/MEG Guillaume Flandin
Event-related fMRI (er-fMRI)
Wellcome Centre for Neuroimaging at UCL
Group Analyses Guillaume Flandin SPM Course Zurich, February 2014
Group analysis Kherif Ferath Wellcome Trust Centre for Neuroimaging University College London SPM Course London, Oct 2010.
1st level analysis: basis functions, parametric modulation and correlated regressors. 1 st of February 2012 Sylvia Kreutzer Max-Philipp Stenner Methods.
Experimental design of fMRI studies SPM Course 2014 Sandra Iglesias Translational Neuromodeling Unit University of Zurich & ETH Zurich With many thanks.
Experimental design of fMRI studies Methods & models for fMRI data analysis in neuroeconomics April 2010 Klaas Enno Stephan Laboratory for Social and Neural.
Bayesian models for fMRI data
Experimental design of fMRI studies SPM Course 2012 Sandra Iglesias Translational Neuromodeling Unit University of Zurich & ETH Zurich With many thanks.
Multiple comparison correction Methods & models for fMRI data analysis 18 March 2009 Klaas Enno Stephan Laboratory for Social and Neural Systems Research.
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