Presentation is loading. Please wait.

Presentation is loading. Please wait.

Job submission and automated installation of ARC grid Runtime Environments.

Similar presentations


Presentation on theme: "Job submission and automated installation of ARC grid Runtime Environments."— Presentation transcript:

1 Job submission and automated installation of ARC grid Runtime Environments

2 Legend User shell input Observation in Janitor log file

3 Create proxy certificate grid-proxy-init Your identity: /O=GermanGrid/OU=UniLuebeck/CN=Daniel Bayer Enter GRID pass phrase for this identity: Creating proxy Done Your proxy is valid until: Wed Nov 7 04:43:

4 Job submission $ ngsub -c grid-dev.inb.uni-luebeck.de test.xrsl Job wurde submitted mit Job ID: gsiftp://grid-dev.inb.uni-luebeck.de: 2811/jobs/ & (executable = "run.sh" ) (arguments = "weka.classifiers.trees.J48" "-t" "weather.arff") ("inputfiles" = ("weather.arff" "" )) ("stderr" = "stderr" ) ("stdout" = "stdout" ) ("gmlog" = "gmlog" ) ("runtimeenvironment" = "APPS/BIO/WEKA ")

5 Submitting job: job registration registering new job (APPS/BIO/WEKA ) sucessfully registered job

6 Preparing Job: dependency download use basesystem "debian::etch_tar" for dynamically installed rte installing package

7 Preparing Job: dependency installation Installing /tmp/jre_1_bNCeM5PY_ tar.gz Successfully installed "/tmp/jre_1_bNCeM5PY_ tar.gz" in "/grid/runtime/janitor- dev/jre__MbMiNikwGG"

8 Preparing job: package installation installing package Installing /tmp/weka-3_w7LN4t1x_.4.10.tar.gz Successfully installed "/tmp/weka-3_w7LN4t1x_.4.10.tar.gz" in "/grid/runtime/janitor- dev/weka_5onnE2YOhH"

9 Preparing job: initialisaition completed sucessfully initialized job

10 Jobs are registered to REs perl Janitor.pl info Registered Jobs: * rte: APPS/BIO/WEKA state: INITIALIZED - age: 5 seconds Locally Installed RTEs: * APPS/BIO/LAGAN-1.2 * APPS/BIO/TFBS * APPS/BIO/TCOFFEE-2.5 * APPS/STATISTICS/R Known Dynamic RTEs: * APPS/BIO/WEKA state: INSTALLED_A - used:

11 Communicating to Information System connection from :58816

12 Finishing: Unassign job from RE removing job : removed

13 User's interest: RE state $ perl Janitor.pl info Registered Jobs: Locally Installed RTEs: * APPS/BIO/LAGAN-1.2 * APPS/BIO/TFBS * APPS/BIO/TCOFFEE-2.5 * APPS/STATISTICS/R Known Dynamic RTEs: * APPS/BIO/WEKA state: INSTALLED_A

14 User: Collect data ngget -a Ergebnisse werden abgelegt unter /nfshome/bayer/arbeit/svn/grid/weka/3.4.10/test/ Jobs bearbeitet: 1, erfolgreich heruntergeladen: 1

15 Job successful: dynamic RE validation perl Janitor.pl setstate VALIDATED APPS/BIO/WEKA

16 Job successful: dynamic RE validated $ perl Janitor.pl info Registered Jobs: Locally Installed RTEs: * APPS/BIO/LAGAN-1.2 * APPS/BIO/TFBS * APPS/BIO/TCOFFEE-2.5 * APPS/STATISTICS/R Known Dynamic RTEs: * APPS/BIO/WEKA state: VALIDATED

17 Clean up $ perl Janitor.pl setstate REMOVAL_PENDING APPS/BIO/WEKA

18 Clean up $ perl Janitor.pl info Registered Jobs: Locally Installed RTEs: * APPS/BIO/LAGAN-1.2 * APPS/BIO/TFBS * APPS/BIO/TCOFFEE-2.5 * APPS/STATISTICS/R Known Dynamic RTEs: * APPS/BIO/WEKA state: REMOVAL_PENDING $ perl Janitor.pl sweep


Download ppt "Job submission and automated installation of ARC grid Runtime Environments."

Similar presentations


Ads by Google