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Genomics: READING genome sequences ASSEMBLY of the sequence ANNOTATION of the sequence carry out dideoxy sequencing connect seqs. to make whole chromosomes.

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Presentation on theme: "Genomics: READING genome sequences ASSEMBLY of the sequence ANNOTATION of the sequence carry out dideoxy sequencing connect seqs. to make whole chromosomes."— Presentation transcript:

1 Genomics: READING genome sequences ASSEMBLY of the sequence ANNOTATION of the sequence carry out dideoxy sequencing connect seqs. to make whole chromosomes find the genes! “FIRST” generation sequencing

2 M.L. Metzker 2010. Nature Genetics Reviews 11, 31. First, 5 slides, in order of Figs. Ion torrent Nanopore

3 5 Selected Technologies. 2 nd, 3 rd, and 4 th generation sequencing. Using Metzker, M.L. 2010, and T.P. Niedringhaus 2011Anal. Chem. 83, 4327. Solexa - - ->Illumina

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7 Allows both directions: “pair-end”

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9 Life: Roche/454; Polonator Soon to be bought by Thermo Fischer

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12 NONE USED IN ROCHE/LIFE 454 PYROSEQUENCING

13 Ion Torrent (BIU) http://www.iontorrent.com/1-trillion-front-end/

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18 Pacific Biosciences

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21 New Generation: Template With hairpins On each end

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23 Nanopore DNA sequencing

24 http://lifetech-it.hosted.jivesoftware.com/videos/1016 ??? work

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